Analysis of interatomic Contacts of Structural Units in PDB entry:
3WOA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WOA entry

There is 1 chain in PDB entry 3WOA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3THR 415
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 3WOA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 29Right-handed alpha
Helix 2
2
A
35 40Right-handed alpha
Helix 3
3
A
65 81Right-handed alpha
Helix 4
4
A
91 102Right-handed alpha
Helix 5
5
A
115 122Right-handed alpha
Helix 6
6
A
131 136Right-handed alpha
Helix 7
7
A
139 146Right-handed alpha
Helix 8
8
A
177 179Right-handed 310
Helix 9
9
A
180 190Right-handed alpha
Helix 10
10
A
202 205Right-handed 310
Helix 11
11
A
206 213Right-handed alpha
Helix 12
12
A
234 250Right-handed alpha
Helix 13
13
A
258 268Right-handed alpha
Helix 14
14
A
277 279Right-handed 310
Helix 15
15
A
280 287Right-handed alpha
Helix 16
16
A
321 332Right-handed alpha
Helix 17
17
A
335 346Right-handed alpha
Helix 18
18
A
353 361Right-handed alpha
Helix 19
19
A
363 376Right-handed alpha
Helix 20
20
A
384 401Right-handed alpha
Helix 21
21
A
405 414Right-handed alpha
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There are 5 sheets in PDB entry 3WOA. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 87first strand
Strand 2
A
55 59parallel
Strand 3
A
108 112parallel
Strand 4
A
307 315anti-parallel
Strand 5
A
155 160anti-parallel
Strand 6
A
350 351anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 87first strand
Strand 2
A
55 59parallel
Strand 3
A
108 112parallel
Strand 4
A
307 315anti-parallel
Strand 5
A
377 378parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 148first strand
Strand 2
A
151 152anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 196first strand
Strand 2
A
271 276parallel
Strand 3
A
163 167anti-parallel
Strand 4
A
291 294anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 221first strand
Strand 2
A
224 231anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il