Analysis of interatomic Contacts of Structural Units in PDB entry:
3WOF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3WOF entry

There are 11 chains in PDB entry 3WOF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 701	GLN 829
B	VAL 6	LEU 107
C	GLY 701	GLN 829
D	PRO 5	LEU 107
E	ILE 703	GLN 829
F	PRO 5	LEU 107
G	PRO 702	LYS 830
H	VAL 6	LEU 107
I	PRO 702	LYS 830
J	VAL 6	LEU 107
K	PRO 702	ARG 802

There are 36 helices in PDB entry 3WOF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	730	735	Right-handed alpha
Helix 2	2	A	768	778	Right-handed alpha
Helix 3	3	B	7	15	Right-handed alpha
Helix 4	4	C	730	735	Right-handed alpha
Helix 5	5	C	768	778	Right-handed alpha
Helix 6	6	D	6	15	Right-handed alpha
Helix 7	7	E	730	735	Right-handed alpha
Helix 8	8	E	768	778	Right-handed alpha
Helix 9	9	F	6	15	Right-handed alpha
Helix 10	10	G	730	735	Right-handed alpha
Helix 11	11	G	769	778	Right-handed alpha
Helix 12	12	H	7	15	Right-handed alpha
Helix 13	13	I	730	735	Right-handed alpha
Helix 14	14	I	768	778	Right-handed alpha
Helix 15	15	J	7	15	Right-handed alpha
Helix 16	16	K	730	735	Right-handed alpha
Helix 17	17	K	768	779	Right-handed alpha
Helix 18	18	L	7	15	Right-handed alpha
Helix 19	19	M	730	735	Right-handed alpha
Helix 20	20	M	768	775	Right-handed alpha
Helix 21	21	N	6	15	Right-handed alpha
Helix 22	22	O	730	735	Right-handed alpha
Helix 23	23	O	768	775	Right-handed alpha
Helix 24	24	P	7	15	Right-handed alpha
Helix 25	25	Q	730	735	Right-handed alpha
Helix 26	26	Q	768	778	Right-handed alpha
Helix 27	27	R	7	15	Right-handed alpha
Helix 28	28	S	730	735	Right-handed alpha
Helix 29	29	S	768	778	Right-handed alpha
Helix 30	30	T	7	15	Right-handed alpha
Helix 31	31	U	730	735	Right-handed alpha
Helix 32	32	U	770	779	Right-handed alpha
Helix 33	33	V	7	15	Right-handed alpha
Helix 34	34	W	730	735	Right-handed alpha
Helix 35	35	W	768	777	Right-handed alpha
Helix 36	36	X	7	15	Right-handed alpha

There are 61 sheets in PDB entry 3WOF. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR, AS, AT, AU, AV, AW, AX, AY, AZ, BA, BB, BC, BD, BE, BF, BG, BH, BI,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	706	713	first strand
Strand 2	A	819	827	anti-parallel
Strand 3	A	798	807	anti-parallel
Strand 4	A	748	749	anti-parallel

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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	721	722	first strand
Strand 2	A	758	761	anti-parallel
Strand 3	A	785	787	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	754	756	first strand
Strand 2	A	790	791	anti-parallel

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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	46	first strand
Strand 2	B	38	39	anti-parallel
Strand 3	B	98	100	parallel
Strand 4	B	79	92	anti-parallel
Strand 5	R	79	92	anti-parallel
Strand 6	R	64	76	anti-parallel
Strand 7	R	52	59	anti-parallel

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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	46	first strand
Strand 2	B	38	39	anti-parallel
Strand 3	B	98	100	parallel
Strand 4	B	79	92	anti-parallel
Strand 5	B	105	106	anti-parallel

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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	52	59	first strand
Strand 2	B	64	76	anti-parallel
Strand 3	B	79	92	anti-parallel
Strand 4	R	79	92	anti-parallel
Strand 5	R	105	106	anti-parallel

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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	52	59	first strand
Strand 2	R	64	76	anti-parallel
Strand 3	R	79	92	anti-parallel
Strand 4	R	98	100	anti-parallel
Strand 5	R	38	39	parallel
Strand 6	R	45	46	anti-parallel

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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	705	713	first strand
Strand 2	C	819	828	anti-parallel
Strand 3	C	798	807	anti-parallel
Strand 4	C	748	749	anti-parallel

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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	721	722	first strand
Strand 2	C	758	761	anti-parallel
Strand 3	C	785	787	anti-parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	754	756	first strand
Strand 2	C	790	791	anti-parallel

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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	45	46	first strand
Strand 2	D	38	39	anti-parallel
Strand 3	D	98	100	parallel
Strand 4	D	79	92	anti-parallel
Strand 5	D	64	76	anti-parallel
Strand 6	D	52	59	anti-parallel

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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	45	46	first strand
Strand 2	D	38	39	anti-parallel
Strand 3	D	98	100	parallel
Strand 4	D	79	92	anti-parallel
Strand 5	D	105	106	anti-parallel

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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	705	713	first strand
Strand 2	E	819	828	anti-parallel
Strand 3	E	798	807	anti-parallel
Strand 4	E	748	749	anti-parallel

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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	721	722	first strand
Strand 2	E	758	762	anti-parallel
Strand 3	E	784	787	anti-parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	754	756	first strand
Strand 2	E	790	791	anti-parallel

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There are 7 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	45	46	first strand
Strand 2	F	38	39	anti-parallel
Strand 3	F	98	100	parallel
Strand 4	F	79	92	anti-parallel
Strand 5	N	79	92	anti-parallel
Strand 6	N	64	75	anti-parallel
Strand 7	N	52	59	anti-parallel

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There are 5 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	45	46	first strand
Strand 2	F	38	39	anti-parallel
Strand 3	F	98	100	parallel
Strand 4	F	79	92	anti-parallel
Strand 5	F	105	106	anti-parallel

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There are 5 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	52	59	first strand
Strand 2	F	64	76	anti-parallel
Strand 3	F	79	92	anti-parallel
Strand 4	N	79	92	anti-parallel
Strand 5	N	105	106	anti-parallel

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There are 6 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	52	59	first strand
Strand 2	N	64	75	anti-parallel
Strand 3	N	79	92	anti-parallel
Strand 4	N	98	100	anti-parallel
Strand 5	N	38	39	parallel
Strand 6	N	45	46	anti-parallel

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There are 4 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	704	713	first strand
Strand 2	G	819	829	anti-parallel
Strand 3	G	798	807	anti-parallel
Strand 4	G	748	749	anti-parallel

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There are 3 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	721	722	first strand
Strand 2	G	758	761	anti-parallel
Strand 3	G	785	787	anti-parallel

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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	754	756	first strand
Strand 2	G	790	791	anti-parallel

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There are 7 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	45	46	first strand
Strand 2	H	38	39	anti-parallel
Strand 3	H	98	100	parallel
Strand 4	H	79	92	anti-parallel
Strand 5	X	79	92	anti-parallel
Strand 6	X	64	76	anti-parallel
Strand 7	X	52	59	anti-parallel

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There are 5 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	45	46	first strand
Strand 2	H	38	39	anti-parallel
Strand 3	H	98	100	parallel
Strand 4	H	79	92	anti-parallel
Strand 5	H	105	106	anti-parallel

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There are 5 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	52	59	first strand
Strand 2	H	64	76	anti-parallel
Strand 3	H	79	92	anti-parallel
Strand 4	X	79	92	anti-parallel
Strand 5	X	105	106	anti-parallel

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There are 6 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	52	59	first strand
Strand 2	X	64	76	anti-parallel
Strand 3	X	79	92	anti-parallel
Strand 4	X	98	100	anti-parallel
Strand 5	X	38	39	parallel
Strand 6	X	45	46	anti-parallel

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There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	704	713	first strand
Strand 2	I	819	829	anti-parallel
Strand 3	I	798	807	anti-parallel
Strand 4	I	748	749	anti-parallel

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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	721	722	first strand
Strand 2	I	758	761	anti-parallel
Strand 3	I	785	787	anti-parallel

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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	754	756	first strand
Strand 2	I	790	791	anti-parallel

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There are 6 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	45	46	first strand
Strand 2	J	38	39	anti-parallel
Strand 3	J	98	100	parallel
Strand 4	J	79	92	anti-parallel
Strand 5	J	64	76	anti-parallel
Strand 6	J	52	59	anti-parallel

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There are 5 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	45	46	first strand
Strand 2	J	38	39	anti-parallel
Strand 3	J	98	100	parallel
Strand 4	J	79	92	anti-parallel
Strand 5	J	105	106	anti-parallel

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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	705	713	first strand
Strand 2	K	819	828	anti-parallel
Strand 3	K	798	807	anti-parallel
Strand 4	K	748	749	anti-parallel

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There are 3 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	721	722	first strand
Strand 2	K	758	761	anti-parallel
Strand 3	K	785	787	anti-parallel

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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	754	756	first strand
Strand 2	K	790	791	anti-parallel

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There are 6 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	45	46	first strand
Strand 2	L	38	39	anti-parallel
Strand 3	L	98	100	parallel
Strand 4	L	79	92	anti-parallel
Strand 5	L	64	76	anti-parallel
Strand 6	L	52	59	anti-parallel

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There are 5 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	45	46	first strand
Strand 2	L	38	39	anti-parallel
Strand 3	L	98	100	parallel
Strand 4	L	79	92	anti-parallel
Strand 5	L	105	106	anti-parallel

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There are 4 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	704	713	first strand
Strand 2	M	819	829	anti-parallel
Strand 3	M	798	807	anti-parallel
Strand 4	M	748	749	anti-parallel

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There are 3 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	721	722	first strand
Strand 2	M	758	761	anti-parallel
Strand 3	M	785	787	anti-parallel

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There are 2 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	754	756	first strand
Strand 2	M	790	791	anti-parallel

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There are 4 strands in AN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	704	713	first strand
Strand 2	O	819	829	anti-parallel
Strand 3	O	798	807	anti-parallel
Strand 4	O	748	749	anti-parallel

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There are 3 strands in AO sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	721	722	first strand
Strand 2	O	758	761	anti-parallel
Strand 3	O	785	787	anti-parallel

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There are 2 strands in AP sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	754	756	first strand
Strand 2	O	790	791	anti-parallel

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There are 6 strands in AQ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	45	46	first strand
Strand 2	P	38	39	anti-parallel
Strand 3	P	98	100	parallel
Strand 4	P	79	92	anti-parallel
Strand 5	P	64	76	anti-parallel
Strand 6	P	52	59	anti-parallel

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There are 5 strands in AR sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	45	46	first strand
Strand 2	P	38	39	anti-parallel
Strand 3	P	98	100	parallel
Strand 4	P	79	92	anti-parallel
Strand 5	P	105	106	anti-parallel

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There are 4 strands in AS sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	704	713	first strand
Strand 2	Q	819	829	anti-parallel
Strand 3	Q	798	807	anti-parallel
Strand 4	Q	748	749	anti-parallel

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There are 3 strands in AT sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	721	722	first strand
Strand 2	Q	758	761	anti-parallel
Strand 3	Q	785	787	anti-parallel

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There are 2 strands in AU sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	754	756	first strand
Strand 2	Q	790	791	anti-parallel

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There are 4 strands in AV sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	704	713	first strand
Strand 2	S	819	829	anti-parallel
Strand 3	S	798	807	anti-parallel
Strand 4	S	748	749	anti-parallel

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There are 3 strands in AW sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	721	722	first strand
Strand 2	S	758	761	anti-parallel
Strand 3	S	785	787	anti-parallel

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There are 2 strands in AX sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	754	756	first strand
Strand 2	S	790	791	anti-parallel

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There are 6 strands in AY sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	45	46	first strand
Strand 2	T	38	39	anti-parallel
Strand 3	T	98	100	parallel
Strand 4	T	79	92	anti-parallel
Strand 5	T	64	76	anti-parallel
Strand 6	T	52	59	anti-parallel

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There are 5 strands in AZ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	45	46	first strand
Strand 2	T	38	39	anti-parallel
Strand 3	T	98	100	parallel
Strand 4	T	79	92	anti-parallel
Strand 5	T	105	106	anti-parallel

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There are 3 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	708	713	first strand
Strand 2	U	819	826	anti-parallel
Strand 3	U	802	807	anti-parallel

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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	721	722	first strand
Strand 2	U	758	761	anti-parallel
Strand 3	U	785	787	anti-parallel

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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	748	749	first strand
Strand 2	U	798	799	anti-parallel

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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	754	756	first strand
Strand 2	U	790	791	anti-parallel

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There are 6 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	45	46	first strand
Strand 2	V	38	39	anti-parallel
Strand 3	V	98	100	parallel
Strand 4	V	79	92	anti-parallel
Strand 5	V	64	76	anti-parallel
Strand 6	V	52	59	anti-parallel

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There are 5 strands in BF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	45	46	first strand
Strand 2	V	38	39	anti-parallel
Strand 3	V	98	100	parallel
Strand 4	V	79	92	anti-parallel
Strand 5	V	105	106	anti-parallel

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There are 4 strands in BG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	704	713	first strand
Strand 2	W	819	829	anti-parallel
Strand 3	W	798	807	anti-parallel
Strand 4	W	748	749	anti-parallel

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There are 3 strands in BH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	721	722	first strand
Strand 2	W	758	761	anti-parallel
Strand 3	W	785	787	anti-parallel

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There are 2 strands in BI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	754	756	first strand
Strand 2	W	790	791	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3WOF

Analysis of interatomic Contacts of Structural Units in PDB entry:
3WOF