Analysis of interatomic Contacts of Structural Units in PDB entry:
3WOV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WOV entry

There is 1 chain in PDB entry 3WOV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 492ALA 970
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 3WOV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
493 500Right-handed alpha
Helix 2
2
A
518 523Right-handed alpha
Helix 3
3
A
540 551Right-handed alpha
Helix 4
4
A
552 557Right-handed 310
Helix 5
5
A
560 564Right-handed 310
Helix 6
6
A
573 576Right-handed 310
Helix 7
7
A
577 586Right-handed alpha
Helix 8
8
A
589 594Right-handed alpha
Helix 9
9
A
689 691Right-handed 310
Helix 10
10
A
693 700Right-handed alpha
Helix 11
11
A
709 717Right-handed alpha
Helix 12
12
A
927 938Right-handed alpha
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There are 7 sheets in PDB entry 3WOV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
511 512first strand
Strand 2
A
567 571parallel
Strand 3
A
727 732anti-parallel
Strand 4
A
718 723anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
606 610first strand
Strand 2
A
682 687anti-parallel
Strand 3
A
674 678anti-parallel
Strand 4
A
650 653parallel
Strand 5
A
659 661anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
615 617first strand
Strand 2
A
624 627anti-parallel
Strand 3
A
636 639anti-parallel
Strand 4
A
645 646anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
747 750first strand
Strand 2
A
735 744anti-parallel
Strand 3
A
757 767anti-parallel
Strand 4
A
805 811anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
786 797first strand
Strand 2
A
772 782anti-parallel
Strand 3
A
816 827anti-parallel
Strand 4
A
944 967anti-parallel
Strand 5
A
865 880anti-parallel
Strand 6
A
893 904anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
786 797first strand
Strand 2
A
772 782anti-parallel
Strand 3
A
816 827anti-parallel
Strand 4
A
944 967anti-parallel
Strand 5
A
865 880anti-parallel
Strand 6
A
909 911anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
829 830first strand
Strand 2
A
857 861anti-parallel
Strand 3
A
914 918anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il