Analysis of interatomic Contacts of Structural Units in PDB entry:
3WPQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WPQ entry

There are 2 chains in PDB entry 3WPQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 346VAL 545
B
 GLU 348VAL 545
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 3WPQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
350 355Right-handed 310
Helix 2
2
A
363 377Right-handed alpha
Helix 3
3
A
389 402Right-handed alpha
Helix 4
4
A
408 412Right-handed 310
Helix 5
5
A
414 428Right-handed alpha
Helix 6
6
A
438 448Right-handed alpha
Helix 7
7
A
450 463Right-handed alpha
Helix 8
8
A
466 486Right-handed alpha
Helix 9
9
A
492 505Right-handed alpha
Helix 10
10
A
513 533Right-handed alpha
Helix 11
11
A
535 541Right-handed alpha
Helix 12
12
B
350 355Right-handed 310
Helix 13
13
B
363 377Right-handed alpha
Helix 14
14
B
389 404Right-handed alpha
Helix 15
15
B
408 412Right-handed 310
Helix 16
16
B
414 428Right-handed alpha
Helix 17
17
B
438 448Right-handed alpha
Helix 18
18
B
450 464Right-handed alpha
Helix 19
19
B
466 486Right-handed alpha
Helix 20
20
B
492 505Right-handed alpha
Helix 21
21
B
513 533Right-handed alpha
Helix 22
22
B
535 541Right-handed alpha
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There are no sheets in PDB entry 3WPQ
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il