Analysis of interatomic Contacts of Structural Units in PDB entry:
3WQG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WQG entry

There are 2 chains in PDB entry 3WQG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 2TRP 380
B
 HIS -8TRP 380
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 3WQG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 35Right-handed alpha
Helix 2
2
A
41 45Right-handed 310
Helix 3
3
A
47 58Right-handed alpha
Helix 4
4
A
66 76Right-handed alpha
Helix 5
5
A
88 90Right-handed 310
Helix 6
6
A
91 101Right-handed alpha
Helix 7
7
A
111 126Right-handed alpha
Helix 8
8
A
148 162Right-handed alpha
Helix 9
9
A
173 179Right-handed 310
Helix 10
10
A
181 206Right-handed alpha
Helix 11
11
A
217 224Right-handed alpha
Helix 12
12
A
236 240Right-handed 310
Helix 13
13
A
242 249Right-handed alpha
Helix 14
14
A
252 256Right-handed 310
Helix 15
15
A
279 284Right-handed alpha
Helix 16
16
A
287 292Right-handed 310
Helix 17
17
A
334 339Right-handed alpha
Helix 18
18
A
351 358Right-handed alpha
Helix 19
19
B
-7 2Right-handed alpha
Helix 20
20
B
17 35Right-handed alpha
Helix 21
21
B
42 45Right-handed 310
Helix 22
22
B
47 57Right-handed alpha
Helix 23
23
B
66 76Right-handed alpha
Helix 24
24
B
88 90Right-handed 310
Helix 25
25
B
91 101Right-handed alpha
Helix 26
26
B
111 126Right-handed alpha
Helix 27
27
B
148 162Right-handed alpha
Helix 28
28
B
173 179Right-handed 310
Helix 29
29
B
181 206Right-handed alpha
Helix 30
30
B
217 224Right-handed alpha
Helix 31
31
B
236 240Right-handed 310
Helix 32
32
B
242 249Right-handed alpha
Helix 33
33
B
252 256Right-handed 310
Helix 34
34
B
269 272Right-handed 310
Helix 35
35
B
279 284Right-handed alpha
Helix 36
36
B
287 292Right-handed 310
Helix 37
37
B
334 339Right-handed alpha
Helix 38
38
B
351 357Right-handed alpha
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There are 6 sheets in PDB entry 3WQG. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
371 375first strand
Strand 2
A
361 365anti-parallel
Strand 3
A
12 16parallel
Strand 4
A
258 268anti-parallel
Strand 5
A
344 348anti-parallel
Strand 6
A
300 302anti-parallel
Strand 7
A
308 317anti-parallel
Strand 8
A
322 326anti-parallel
Strand 9
A
273 276anti-parallel
Strand 10
A
258 268anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 38first strand
Strand 2
A
232 233parallel
Strand 3
A
212 215parallel
Strand 4
A
165 170parallel
Strand 5
A
130 136parallel
Strand 6
A
104 109parallel
Strand 7
A
80 83parallel
Strand 8
A
62 64parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 38first strand
Strand 2
A
232 233parallel
Strand 3
A
212 215parallel
Strand 4
A
165 170parallel
Strand 5
A
130 136parallel
Strand 6
A
144 145parallel
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There are 10 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
371 375first strand
Strand 2
B
361 365anti-parallel
Strand 3
B
12 16parallel
Strand 4
B
258 268anti-parallel
Strand 5
B
344 348anti-parallel
Strand 6
B
300 303anti-parallel
Strand 7
B
308 317anti-parallel
Strand 8
B
322 326anti-parallel
Strand 9
B
273 276anti-parallel
Strand 10
B
258 268anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
37 40first strand
Strand 2
B
232 235parallel
Strand 3
B
212 215parallel
Strand 4
B
165 170parallel
Strand 5
B
130 136parallel
Strand 6
B
104 109parallel
Strand 7
B
80 83parallel
Strand 8
B
62 64parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
37 40first strand
Strand 2
B
232 235parallel
Strand 3
B
212 215parallel
Strand 4
B
165 170parallel
Strand 5
B
130 136parallel
Strand 6
B
144 145parallel
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