Analysis of interatomic Contacts of Structural Units in PDB entry:
3WQL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WQL entry

There are 4 chains in PDB entry 3WQL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 2ALA 294
B
 ASN 2GLY 296
C
 LEU 3GLY 296
D
 ASN 2GLU 295
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 3WQL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 12Right-handed alpha
Helix 2
2
A
13 25Right-handed alpha
Helix 3
3
A
35 44Right-handed alpha
Helix 4
4
A
50 69Right-handed alpha
Helix 5
5
A
92 102Right-handed alpha
Helix 6
6
A
104 114Right-handed alpha
Helix 7
7
A
123 128Right-handed alpha
Helix 8
8
A
131 148Right-handed alpha
Helix 9
9
A
165 181Right-handed alpha
Helix 10
10
A
185 195Right-handed alpha
Helix 11
11
A
231 235Right-handed 310
Helix 12
12
A
236 250Right-handed alpha
Helix 13
13
A
258 262Right-handed 310
Helix 14
14
A
263 277Right-handed alpha
Helix 15
15
B
5 12Right-handed alpha
Helix 16
16
B
13 25Right-handed alpha
Helix 17
17
B
35 44Right-handed alpha
Helix 18
18
B
50 69Right-handed alpha
Helix 19
19
B
91 104Right-handed alpha
Helix 20
20
B
104 114Right-handed alpha
Helix 21
21
B
123 128Right-handed alpha
Helix 22
22
B
131 148Right-handed alpha
Helix 23
23
B
165 181Right-handed alpha
Helix 24
24
B
185 195Right-handed alpha
Helix 25
25
B
231 235Right-handed 310
Helix 26
26
B
236 250Right-handed alpha
Helix 27
27
B
258 262Right-handed 310
Helix 28
28
B
263 277Right-handed alpha
Helix 29
29
C
5 12Right-handed alpha
Helix 30
30
C
13 25Right-handed alpha
Helix 31
31
C
35 44Right-handed alpha
Helix 32
32
C
50 69Right-handed alpha
Helix 33
33
C
92 103Right-handed alpha
Helix 34
34
C
104 114Right-handed alpha
Helix 35
35
C
123 128Right-handed alpha
Helix 36
36
C
131 148Right-handed alpha
Helix 37
37
C
165 181Right-handed alpha
Helix 38
38
C
185 195Right-handed alpha
Helix 39
39
C
231 235Right-handed 310
Helix 40
40
C
236 250Right-handed alpha
Helix 41
41
C
258 262Right-handed 310
Helix 42
42
C
263 277Right-handed alpha
Helix 43
43
D
5 12Right-handed alpha
Helix 44
44
D
13 25Right-handed alpha
Helix 45
45
D
35 44Right-handed alpha
Helix 46
46
D
50 69Right-handed alpha
Helix 47
47
D
93 104Right-handed alpha
Helix 48
48
D
104 114Right-handed alpha
Helix 49
49
D
123 128Right-handed alpha
Helix 50
50
D
131 148Right-handed alpha
Helix 51
51
D
165 181Right-handed alpha
Helix 52
52
D
185 195Right-handed alpha
Helix 53
53
D
231 235Right-handed 310
Helix 54
54
D
236 250Right-handed alpha
Helix 55
55
D
258 262Right-handed 310
Helix 56
56
D
263 276Right-handed alpha
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There are 8 sheets in PDB entry 3WQL. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 121first strand
Strand 2
A
154 160parallel
Strand 3
A
73 79parallel
Strand 4
A
28 30parallel
Strand 5
A
203 207parallel
Strand 6
A
224 228parallel
Strand 7
B
281 282anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
281 282first strand
Strand 2
B
224 228anti-parallel
Strand 3
B
203 207parallel
Strand 4
B
28 30parallel
Strand 5
B
73 79parallel
Strand 6
B
154 160parallel
Strand 7
B
116 121parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
286 288first strand
Strand 2
A
291 293anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
285 288first strand
Strand 2
B
291 294anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
116 121first strand
Strand 2
C
154 160parallel
Strand 3
C
73 79parallel
Strand 4
C
28 30parallel
Strand 5
C
203 207parallel
Strand 6
C
224 228parallel
Strand 7
D
281 282anti-parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
281 282first strand
Strand 2
D
224 228anti-parallel
Strand 3
D
203 207parallel
Strand 4
D
28 30parallel
Strand 5
D
73 79parallel
Strand 6
D
154 160parallel
Strand 7
D
116 121parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
285 288first strand
Strand 2
C
291 294anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
285 288first strand
Strand 2
D
291 294anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il