Analysis of interatomic Contacts of Structural Units in PDB entry:
3WQS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WQS entry

There is 1 chain in PDB entry 3WQS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 PRO 77ASN 486
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 3WQS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
B
87 104Right-handed alpha
Helix 2
2
B
117 129Right-handed alpha
Helix 3
3
B
137 140Right-handed 310
Helix 4
4
B
141 146Right-handed alpha
Helix 5
5
B
147 151Right-handed 310
Helix 6
6
B
161 171Right-handed alpha
Helix 7
7
B
183 185Right-handed 310
Helix 8
8
B
186 196Right-handed alpha
Helix 9
9
B
205 222Right-handed alpha
Helix 10
10
B
231 240Right-handed alpha
Helix 11
11
B
242 247Right-handed alpha
Helix 12
12
B
255 260Right-handed alpha
Helix 13
13
B
278 285Right-handed alpha
Helix 14
14
B
286 292Right-handed alpha
Helix 15
15
B
299 309Right-handed alpha
Helix 16
16
B
309 324Right-handed alpha
Helix 17
17
B
326 328Right-handed 310
Helix 18
18
B
360 370Right-handed alpha
Helix 19
19
B
382 387Right-handed alpha
Helix 20
20
B
399 412Right-handed alpha
Helix 21
21
B
414 432Right-handed alpha
Helix 22
22
B
436 451Right-handed alpha
Helix 23
23
B
459 484Right-handed alpha
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There are 2 sheets in PDB entry 3WQS. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
157 160first strand
Strand 2
B
132 135parallel
Strand 3
B
107 114parallel
Strand 4
B
78 83parallel
Strand 5
B
176 179parallel
Strand 6
B
199 202parallel
Strand 7
B
226 229parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
330 334first strand
Strand 2
B
262 269parallel
Strand 3
B
340 346anti-parallel
Strand 4
B
351 355anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il