Analysis of interatomic Contacts of Structural Units in PDB entry:
3WR5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WR5 entry

There are 4 chains in PDB entry 3WR5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA -3PHE 397
B
MET -2GLU 392
C
GLY -4GLU 392
D
GLY -1LEU 374
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 83 helices in PDB entry 3WR5. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
56 59Right-handed 310
Helix 2
2
A
60 67Right-handed alpha
Helix 3
3
A
82 89Right-handed alpha
Helix 4
4
A
105 112Right-handed alpha
Helix 5
5
A
129 137Right-handed alpha
Helix 6
6
A
147 165Right-handed alpha
Helix 7
7
A
165 175Right-handed alpha
Helix 8
8
A
179 185Right-handed alpha
Helix 9
9
A
201 212Right-handed alpha
Helix 10
10
A
213 215Right-handed 310
Helix 11
11
A
227 235Right-handed alpha
Helix 12
12
A
241 246Right-handed alpha
Helix 13
13
A
247 249Right-handed 310
Helix 14
14
A
267 272Right-handed alpha
Helix 15
15
A
285 289Right-handed 310
Helix 16
16
A
290 300Right-handed alpha
Helix 17
17
A
320 325Right-handed alpha
Helix 18
18
A
334 337Right-handed 310
Helix 19
19
A
338 359Right-handed alpha
Helix 20
20
A
363 365Right-handed 310
Helix 21
21
A
376 382Right-handed alpha
Helix 22
22
A
390 397Right-handed 310
Helix 23
23
B
56 59Right-handed 310
Helix 24
24
B
60 67Right-handed alpha
Helix 25
25
B
82 89Right-handed alpha
Helix 26
26
B
105 112Right-handed alpha
Helix 27
27
B
129 137Right-handed alpha
Helix 28
28
B
147 165Right-handed alpha
Helix 29
29
B
165 175Right-handed alpha
Helix 30
30
B
179 185Right-handed alpha
Helix 31
31
B
201 212Right-handed alpha
Helix 32
32
B
213 215Right-handed 310
Helix 33
33
B
227 235Right-handed alpha
Helix 34
34
B
241 246Right-handed alpha
Helix 35
35
B
247 249Right-handed 310
Helix 36
36
B
267 272Right-handed alpha
Helix 37
37
B
285 289Right-handed 310
Helix 38
38
B
290 300Right-handed alpha
Helix 39
39
B
320 324Right-handed 310
Helix 40
40
B
334 337Right-handed 310
Helix 41
41
B
338 358Right-handed alpha
Helix 42
42
B
363 365Right-handed 310
Helix 43
43
B
376 382Right-handed alpha
Helix 44
44
C
56 59Right-handed 310
Helix 45
45
C
60 67Right-handed alpha
Helix 46
46
C
82 89Right-handed alpha
Helix 47
47
C
105 112Right-handed alpha
Helix 48
48
C
129 137Right-handed alpha
Helix 49
49
C
147 164Right-handed alpha
Helix 50
50
C
165 175Right-handed alpha
Helix 51
51
C
179 185Right-handed alpha
Helix 52
52
C
201 212Right-handed alpha
Helix 53
53
C
213 215Right-handed 310
Helix 54
54
C
227 235Right-handed alpha
Helix 55
55
C
241 246Right-handed alpha
Helix 56
56
C
247 249Right-handed 310
Helix 57
57
C
267 272Right-handed alpha
Helix 58
58
C
285 289Right-handed 310
Helix 59
59
C
290 300Right-handed alpha
Helix 60
60
C
334 337Right-handed 310
Helix 61
61
C
338 358Right-handed alpha
Helix 62
62
C
363 365Right-handed 310
Helix 63
63
C
376 382Right-handed alpha
Helix 64
64
D
56 59Right-handed 310
Helix 65
65
D
60 67Right-handed alpha
Helix 66
66
D
82 89Right-handed alpha
Helix 67
67
D
105 112Right-handed alpha
Helix 68
68
D
129 137Right-handed alpha
Helix 69
69
D
147 164Right-handed alpha
Helix 70
70
D
165 175Right-handed alpha
Helix 71
71
D
179 185Right-handed alpha
Helix 72
72
D
201 212Right-handed alpha
Helix 73
73
D
213 215Right-handed 310
Helix 74
74
D
227 235Right-handed alpha
Helix 75
75
D
241 246Right-handed alpha
Helix 76
76
D
247 249Right-handed 310
Helix 77
77
D
267 272Right-handed alpha
Helix 78
78
D
285 289Right-handed 310
Helix 79
79
D
290 300Right-handed alpha
Helix 80
80
D
320 325Right-handed alpha
Helix 81
81
D
334 337Right-handed 310
Helix 82
82
D
338 358Right-handed alpha
Helix 83
83
D
363 365Right-handed 310
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There are 8 sheets in PDB entry 3WR5. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
70 74first strand
Strand 2
A
3 7parallel
Strand 3
A
93 96parallel
Strand 4
A
117 120parallel
Strand 5
A
139 142parallel
Strand 6
A
367 370anti-parallel
Strand 7
A
373 374anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
237 238first strand
Strand 2
A
217 221parallel
Strand 3
A
194 198parallel
Strand 4
A
251 254parallel
Strand 5
A
278 282parallel
Strand 6
A
303 308parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
70 74first strand
Strand 2
B
3 7parallel
Strand 3
B
93 96parallel
Strand 4
B
117 120parallel
Strand 5
B
139 142parallel
Strand 6
B
367 370anti-parallel
Strand 7
B
373 374anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
236 238first strand
Strand 2
B
217 221parallel
Strand 3
B
194 198parallel
Strand 4
B
251 254parallel
Strand 5
B
278 282parallel
Strand 6
B
303 307parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
70 74first strand
Strand 2
C
3 7parallel
Strand 3
C
93 96parallel
Strand 4
C
117 120parallel
Strand 5
C
139 142parallel
Strand 6
C
367 370anti-parallel
Strand 7
C
373 374anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
236 238first strand
Strand 2
C
217 221parallel
Strand 3
C
194 198parallel
Strand 4
C
251 254parallel
Strand 5
C
278 282parallel
Strand 6
C
303 307parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
70 74first strand
Strand 2
D
3 7parallel
Strand 3
D
93 96parallel
Strand 4
D
117 120parallel
Strand 5
D
139 142parallel
Strand 6
D
367 369anti-parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
237 238first strand
Strand 2
D
217 221parallel
Strand 3
D
194 198parallel
Strand 4
D
251 254parallel
Strand 5
D
278 282parallel
Strand 6
D
303 307parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il