Analysis of interatomic Contacts of Structural Units in PDB entry:
3WRY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WRY entry

There are 4 chains in PDB entry 3WRY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 8LYS 431
B
 ASN 7PRO 430
C
 SER 670ALA 1113
D
 SER 675ASP 1112
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 70 helices in PDB entry 3WRY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 39Right-handed alpha
Helix 2
2
A
70 76Right-handed alpha
Helix 3
3
A
81 85Right-handed 310
Helix 4
4
A
90 113Right-handed alpha
Helix 5
5
A
124 136Right-handed alpha
Helix 6
6
A
155 160Right-handed alpha
Helix 7
7
A
177 200Right-handed alpha
Helix 8
8
A
219 221Right-handed 310
Helix 9
9
A
222 236Right-handed alpha
Helix 10
10
A
247 259Right-handed alpha
Helix 11
11
A
271 279Right-handed alpha
Helix 12
12
A
289 296Right-handed alpha
Helix 13
13
A
313 317Right-handed 310
Helix 14
14
A
318 322Right-handed 310
Helix 15
15
A
339 355Right-handed alpha
Helix 16
16
A
382 398Right-handed alpha
Helix 17
17
A
414 429Right-handed alpha
Helix 18
18
B
16 39Right-handed alpha
Helix 19
19
B
70 77Right-handed alpha
Helix 20
20
B
81 85Right-handed 310
Helix 21
21
B
90 114Right-handed alpha
Helix 22
22
B
124 136Right-handed alpha
Helix 23
23
B
155 160Right-handed alpha
Helix 24
24
B
177 201Right-handed alpha
Helix 25
25
B
219 221Right-handed 310
Helix 26
26
B
222 236Right-handed alpha
Helix 27
27
B
247 259Right-handed alpha
Helix 28
28
B
271 279Right-handed alpha
Helix 29
29
B
289 296Right-handed alpha
Helix 30
30
B
313 317Right-handed 310
Helix 31
31
B
318 322Right-handed 310
Helix 32
32
B
339 355Right-handed alpha
Helix 33
33
B
382 397Right-handed alpha
Helix 34
34
B
414 428Right-handed alpha
Helix 35
35
C
671 676Right-handed alpha
Helix 36
36
C
683 688Right-handed 310
Helix 37
37
C
700 730Right-handed alpha
Helix 38
38
C
797 801Right-handed 310
Helix 39
39
C
803 814Right-handed alpha
Helix 40
40
C
838 847Right-handed alpha
Helix 41
41
C
858 871Right-handed alpha
Helix 42
42
C
885 891Right-handed alpha
Helix 43
43
C
908 911Right-handed 310
Helix 44
44
C
912 923Right-handed alpha
Helix 45
45
C
970 981Right-handed alpha
Helix 46
46
C
1002 1006Right-handed 310
Helix 47
47
C
1021 1031Right-handed alpha
Helix 48
48
C
1040 1043Right-handed 310
Helix 49
49
C
1067 1075Right-handed alpha
Helix 50
50
C
1089 1101Right-handed alpha
Helix 51
51
C
1102 1107Right-handed alpha
Helix 52
52
C
1108 1110Right-handed 310
Helix 53
53
D
684 688Right-handed 310
Helix 54
54
D
700 728Right-handed alpha
Helix 55
55
D
799 801Right-handed 310
Helix 56
56
D
803 817Right-handed alpha
Helix 57
57
D
838 847Right-handed alpha
Helix 58
58
D
858 870Right-handed alpha
Helix 59
59
D
885 891Right-handed alpha
Helix 60
60
D
908 911Right-handed 310
Helix 61
61
D
912 923Right-handed alpha
Helix 62
62
D
949 954Right-handed alpha
Helix 63
63
D
970 981Right-handed alpha
Helix 64
64
D
1002 1006Right-handed 310
Helix 65
65
D
1021 1032Right-handed alpha
Helix 66
66
D
1040 1043Right-handed 310
Helix 67
67
D
1067 1075Right-handed alpha
Helix 68
68
D
1089 1101Right-handed alpha
Helix 69
69
D
1102 1107Right-handed alpha
Helix 70
70
D
1108 1110Right-handed 310
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There are 16 sheets in PDB entry 3WRY. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 69first strand
Strand 2
A
47 52parallel
Strand 3
A
9 15parallel
Strand 4
A
115 123parallel
Strand 5
A
144 148parallel
Strand 6
A
165 168parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 244first strand
Strand 2
A
213 218parallel
Strand 3
A
264 267parallel
Strand 4
A
299 301parallel
Strand 5
A
361 366parallel
Strand 6
A
403 408parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
308 310first strand
Strand 2
A
334 337anti-parallel
Strand 3
A
326 328anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
67 69first strand
Strand 2
B
47 52parallel
Strand 3
B
9 15parallel
Strand 4
B
115 123parallel
Strand 5
B
144 148parallel
Strand 6
B
165 168parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
239 244first strand
Strand 2
B
213 218parallel
Strand 3
B
264 267parallel
Strand 4
B
299 301parallel
Strand 5
B
361 366parallel
Strand 6
B
403 408parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
308 311first strand
Strand 2
B
334 337anti-parallel
Strand 3
B
326 328anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
751 754first strand
Strand 2
C
744 746anti-parallel
Strand 3
C
791 795anti-parallel
Strand 4
C
763 768anti-parallel
Strand 5
C
773 777anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
780 781first strand
Strand 2
C
784 785anti-parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
882 884first strand
Strand 2
C
853 856parallel
Strand 3
C
902 906parallel
Strand 4
C
927 932parallel
Strand 5
C
827 832parallel
Strand 6
C
959 962parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
965 966first strand
Strand 2
C
986 987parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
995 999first strand
Strand 2
C
1077 1085parallel
Strand 3
C
1047 1054parallel
Strand 4
C
1016 1019parallel
Strand 5
C
1036 1038parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
751 754first strand
Strand 2
D
742 746anti-parallel
Strand 3
D
791 797anti-parallel
Strand 4
D
763 768anti-parallel
Strand 5
D
773 777anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
780 781first strand
Strand 2
D
784 785anti-parallel
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There are 6 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
882 884first strand
Strand 2
D
853 856parallel
Strand 3
D
902 906parallel
Strand 4
D
927 932parallel
Strand 5
D
827 832parallel
Strand 6
D
959 962parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
965 966first strand
Strand 2
D
986 987parallel
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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
995 999first strand
Strand 2
D
1077 1085parallel
Strand 3
D
1047 1054parallel
Strand 4
D
1016 1019parallel
Strand 5
D
1036 1038parallel
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