Analysis of interatomic Contacts of Structural Units in PDB entry:
3WSY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WSY entry

There are 2 chains in PDB entry 3WSY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 86PRO 753
C
 LEU 42GLN 52
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 10 helices in PDB entry 3WSY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
149 152Right-handed 310
Helix 2
2
A
401 406Right-handed 310
Helix 3
3
A
434 436Right-handed 310
Helix 4
4
A
468 472Right-handed 310
Helix 5
5
A
479 486Right-handed alpha
Helix 6
6
A
617 622Right-handed alpha
Helix 7
7
A
626 628Right-handed 310
Helix 8
8
A
634 638Right-handed 310
Helix 9
9
A
678 680Right-handed 310
Helix 10
10
A
739 746Right-handed alpha
Back to top of page

There are 15 sheets in PDB entry 3WSY. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 97first strand
Strand 2
A
611 616anti-parallel
Strand 3
A
596 603anti-parallel
Strand 4
A
581 587anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 147first strand
Strand 2
A
133 138anti-parallel
Strand 3
A
117 122anti-parallel
Strand 4
A
104 109anti-parallel
Strand 5
C
48 51parallel
Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 169first strand
Strand 2
A
177 181anti-parallel
Strand 3
A
186 190anti-parallel
Strand 4
A
198 201anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 211first strand
Strand 2
A
219 222anti-parallel
Strand 3
A
231 234anti-parallel
Strand 4
A
241 245anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 253first strand
Strand 2
A
264 269anti-parallel
Strand 3
A
275 280anti-parallel
Strand 4
A
290 303anti-parallel
Strand 5
A
306 313anti-parallel
Strand 6
A
323 330anti-parallel
Strand 7
A
336 337anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
339 340first strand
Strand 2
A
381 386parallel
Strand 3
A
370 374anti-parallel
Strand 4
A
359 365anti-parallel
Strand 5
A
346 354anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
391 392first strand
Strand 2
A
411 412anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
414 416first strand
Strand 2
A
424 429anti-parallel
Strand 3
A
438 443anti-parallel
Strand 4
A
451 452anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
474 477first strand
Strand 2
A
504 511anti-parallel
Strand 3
A
495 496anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
474 477first strand
Strand 2
A
504 511anti-parallel
Strand 3
A
519 523anti-parallel
Strand 4
A
531 534anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
538 543first strand
Strand 2
A
548 553anti-parallel
Strand 3
A
560 564anti-parallel
Strand 4
A
572 575anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
630 633first strand
Strand 2
A
647 654anti-parallel
Strand 3
A
670 674anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
682 684first strand
Strand 2
A
728 730anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
688 690first strand
Strand 2
A
699 701anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
721 724first strand
Strand 2
A
748 751anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il