Analysis of interatomic Contacts of Structural Units in PDB entry:
3WT1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WT1 entry

There are 4 chains in PDB entry 3WT1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 206ALA 449
B
 PRO 208ALA 449
C
 PRO 208ALA 449
D
 PRO 208ALA 449
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 3WT1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
217 224Right-handed alpha
Helix 2
2
A
235 253Right-handed alpha
Helix 3
3
A
264 268Right-handed alpha
Helix 4
4
A
269 275Right-handed 310
Helix 5
5
A
304 317Right-handed alpha
Helix 6
6
A
341 343Right-handed 310
Helix 7
7
A
344 350Right-handed alpha
Helix 8
8
A
365 385Right-handed alpha
Helix 9
9
A
432 444Right-handed alpha
Helix 10
10
B
217 224Right-handed alpha
Helix 11
11
B
235 253Right-handed alpha
Helix 12
12
B
264 268Right-handed alpha
Helix 13
13
B
269 275Right-handed 310
Helix 14
14
B
304 317Right-handed alpha
Helix 15
15
B
341 343Right-handed 310
Helix 16
16
B
344 350Right-handed alpha
Helix 17
17
B
365 385Right-handed alpha
Helix 18
18
B
432 444Right-handed alpha
Helix 19
19
C
217 224Right-handed alpha
Helix 20
20
C
235 253Right-handed alpha
Helix 21
21
C
264 268Right-handed alpha
Helix 22
22
C
269 275Right-handed 310
Helix 23
23
C
304 317Right-handed alpha
Helix 24
24
C
341 343Right-handed 310
Helix 25
25
C
344 350Right-handed alpha
Helix 26
26
C
365 385Right-handed alpha
Helix 27
27
C
432 444Right-handed alpha
Helix 28
28
D
217 224Right-handed alpha
Helix 29
29
D
235 253Right-handed alpha
Helix 30
30
D
264 268Right-handed alpha
Helix 31
31
D
269 275Right-handed 310
Helix 32
32
D
304 317Right-handed alpha
Helix 33
33
D
341 343Right-handed 310
Helix 34
34
D
344 350Right-handed alpha
Helix 35
35
D
365 385Right-handed alpha
Helix 36
36
D
432 444Right-handed alpha
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There are 8 sheets in PDB entry 3WT1. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 212first strand
Strand 2
A
258 263parallel
Strand 3
A
228 233parallel
Strand 4
A
283 288anti-parallel
Strand 5
A
293 296anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
338 340first strand
Strand 2
A
391 397parallel
Strand 3
A
355 361parallel
Strand 4
A
412 416anti-parallel
Strand 5
A
425 426anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
210 212first strand
Strand 2
B
258 263parallel
Strand 3
B
228 233parallel
Strand 4
B
283 288anti-parallel
Strand 5
B
293 296anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
338 340first strand
Strand 2
B
391 397parallel
Strand 3
B
355 361parallel
Strand 4
B
412 416anti-parallel
Strand 5
B
425 426anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
210 212first strand
Strand 2
C
258 263parallel
Strand 3
C
228 233parallel
Strand 4
C
283 288anti-parallel
Strand 5
C
293 296anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
338 340first strand
Strand 2
C
391 397parallel
Strand 3
C
355 361parallel
Strand 4
C
412 416anti-parallel
Strand 5
C
425 426anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
210 212first strand
Strand 2
D
258 263parallel
Strand 3
D
228 233parallel
Strand 4
D
283 288anti-parallel
Strand 5
D
293 296anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
338 340first strand
Strand 2
D
391 397parallel
Strand 3
D
355 361parallel
Strand 4
D
412 416anti-parallel
Strand 5
D
425 426anti-parallel
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