Analysis of interatomic Contacts of Structural Units in PDB entry:
3WTB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WTB entry

There are 6 chains in PDB entry 3WTB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
HIS 0ALA 243
B
HIS 0ALA 243
C
MET 1ALA 243
D
MET 1ALA 243
E
MET 1ALA 243
F
MET 1LEU 159
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 96 helices in PDB entry 3WTB. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
13 26Right-handed alpha
Helix 2
2
A
37 51Right-handed alpha
Helix 3
3
A
64 80Right-handed alpha
Helix 4
4
A
96 100Right-handed 310
Helix 5
5
A
101 113Right-handed alpha
Helix 6
6
A
113 124Right-handed alpha
Helix 7
7
A
138 142Right-handed 310
Helix 8
8
A
149 171Right-handed alpha
Helix 9
9
A
172 174Right-handed 310
Helix 10
10
A
194 203Right-handed alpha
Helix 11
11
A
211 224Right-handed alpha
Helix 12
12
A
225 228Right-handed 310
Helix 13
13
B
13 27Right-handed alpha
Helix 14
14
B
37 51Right-handed alpha
Helix 15
15
B
64 80Right-handed alpha
Helix 16
16
B
96 100Right-handed 310
Helix 17
17
B
101 113Right-handed alpha
Helix 18
18
B
113 124Right-handed alpha
Helix 19
19
B
138 142Right-handed 310
Helix 20
20
B
149 171Right-handed alpha
Helix 21
21
B
172 174Right-handed 310
Helix 22
22
B
194 202Right-handed alpha
Helix 23
23
B
211 224Right-handed alpha
Helix 24
24
B
225 228Right-handed 310
Helix 25
25
C
13 26Right-handed alpha
Helix 26
26
C
37 51Right-handed alpha
Helix 27
27
C
64 80Right-handed alpha
Helix 28
28
C
96 100Right-handed 310
Helix 29
29
C
101 113Right-handed alpha
Helix 30
30
C
113 124Right-handed alpha
Helix 31
31
C
138 142Right-handed 310
Helix 32
32
C
149 171Right-handed alpha
Helix 33
33
C
172 174Right-handed 310
Helix 34
34
C
194 202Right-handed alpha
Helix 35
35
C
211 224Right-handed alpha
Helix 36
36
C
225 228Right-handed 310
Helix 37
37
D
13 27Right-handed alpha
Helix 38
38
D
37 51Right-handed alpha
Helix 39
39
D
64 80Right-handed alpha
Helix 40
40
D
96 100Right-handed 310
Helix 41
41
D
101 113Right-handed alpha
Helix 42
42
D
113 124Right-handed alpha
Helix 43
43
D
138 142Right-handed 310
Helix 44
44
D
149 171Right-handed alpha
Helix 45
45
D
172 174Right-handed 310
Helix 46
46
D
194 202Right-handed alpha
Helix 47
47
D
211 224Right-handed alpha
Helix 48
48
D
225 228Right-handed 310
Helix 49
49
E
13 26Right-handed alpha
Helix 50
50
E
37 51Right-handed alpha
Helix 51
51
E
64 80Right-handed alpha
Helix 52
52
E
96 100Right-handed 310
Helix 53
53
E
101 113Right-handed alpha
Helix 54
54
E
113 124Right-handed alpha
Helix 55
55
E
138 142Right-handed 310
Helix 56
56
E
149 171Right-handed alpha
Helix 57
57
E
172 174Right-handed 310
Helix 58
58
E
194 203Right-handed alpha
Helix 59
59
E
211 224Right-handed alpha
Helix 60
60
E
225 228Right-handed 310
Helix 61
61
F
13 27Right-handed alpha
Helix 62
62
F
37 51Right-handed alpha
Helix 63
63
F
64 80Right-handed alpha
Helix 64
64
F
96 100Right-handed 310
Helix 65
65
F
101 113Right-handed alpha
Helix 66
66
F
113 124Right-handed alpha
Helix 67
67
F
138 142Right-handed 310
Helix 68
68
F
149 171Right-handed alpha
Helix 69
69
F
172 174Right-handed 310
Helix 70
70
F
194 202Right-handed alpha
Helix 71
71
F
212 224Right-handed alpha
Helix 72
72
F
225 228Right-handed 310
Helix 73
73
G
13 26Right-handed alpha
Helix 74
74
G
37 51Right-handed alpha
Helix 75
75
G
64 80Right-handed alpha
Helix 76
76
G
96 100Right-handed 310
Helix 77
77
G
101 113Right-handed alpha
Helix 78
78
G
113 124Right-handed alpha
Helix 79
79
G
138 142Right-handed 310
Helix 80
80
G
149 171Right-handed alpha
Helix 81
81
G
172 174Right-handed 310
Helix 82
82
G
194 203Right-handed alpha
Helix 83
83
G
212 224Right-handed alpha
Helix 84
84
G
225 228Right-handed 310
Helix 85
85
H
13 26Right-handed alpha
Helix 86
86
H
37 51Right-handed alpha
Helix 87
87
H
64 80Right-handed alpha
Helix 88
88
H
96 100Right-handed 310
Helix 89
89
H
101 113Right-handed alpha
Helix 90
90
H
113 124Right-handed alpha
Helix 91
91
H
138 142Right-handed 310
Helix 92
92
H
149 171Right-handed alpha
Helix 93
93
H
172 174Right-handed 310
Helix 94
94
H
194 204Right-handed alpha
Helix 95
95
H
211 224Right-handed alpha
Helix 96
96
H
225 228Right-handed 310
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There are 10 sheets in PDB entry 3WTB. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
55 59first strand
Strand 2
A
29 34parallel
Strand 3
A
5 8parallel
Strand 4
A
84 87parallel
Strand 5
A
132 136parallel
Strand 6
A
176 182parallel
Strand 7
A
234 237parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
55 59first strand
Strand 2
B
29 34parallel
Strand 3
B
5 8parallel
Strand 4
B
84 87parallel
Strand 5
B
132 136parallel
Strand 6
B
176 182parallel
Strand 7
B
234 237parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
55 59first strand
Strand 2
C
29 34parallel
Strand 3
C
5 8parallel
Strand 4
C
84 87parallel
Strand 5
C
132 136parallel
Strand 6
C
176 182parallel
Strand 7
C
234 237parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
55 59first strand
Strand 2
D
29 34parallel
Strand 3
D
5 8parallel
Strand 4
D
84 87parallel
Strand 5
D
132 136parallel
Strand 6
D
176 182parallel
Strand 7
D
234 237parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
55 59first strand
Strand 2
E
29 34parallel
Strand 3
E
5 8parallel
Strand 4
E
84 87parallel
Strand 5
E
132 136parallel
Strand 6
E
176 182parallel
Strand 7
E
234 237parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
55 59first strand
Strand 2
F
29 34parallel
Strand 3
F
5 8parallel
Strand 4
F
84 87parallel
Strand 5
F
132 136parallel
Strand 6
F
176 182parallel
Strand 7
F
234 237parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
185 186first strand
Strand 2
F
210 211parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
55 59first strand
Strand 2
G
29 34parallel
Strand 3
G
5 8parallel
Strand 4
G
84 87parallel
Strand 5
G
132 136parallel
Strand 6
G
176 182parallel
Strand 7
G
234 237parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
185 186first strand
Strand 2
G
210 211parallel
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There are 7 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
55 59first strand
Strand 2
H
29 34parallel
Strand 3
H
5 8parallel
Strand 4
H
84 87parallel
Strand 5
H
132 136parallel
Strand 6
H
176 182parallel
Strand 7
H
234 237parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il