Analysis of interatomic Contacts of Structural Units in PDB entry:
3WV6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WV6 entry

There are 2 chains in PDB entry 3WV6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 5THR 323
B
 GLY 5THR 323
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 3WV6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
127 131Right-handed 310
Helix 2
2
A
303 307Right-handed 310
Helix 3
3
B
127 131Right-handed 310
Helix 4
4
B
303 307Right-handed 310
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There are 10 sheets in PDB entry 3WV6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 11first strand
Strand 2
A
140 149anti-parallel
Strand 3
A
29 37anti-parallel
Strand 4
A
98 105anti-parallel
Strand 5
A
109 114anti-parallel
Strand 6
A
117 123anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 20first strand
Strand 2
A
133 138anti-parallel
Strand 3
A
45 50anti-parallel
Strand 4
A
58 65anti-parallel
Strand 5
A
71 78anti-parallel
Strand 6
A
81 82anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 20first strand
Strand 2
A
133 138anti-parallel
Strand 3
A
45 50anti-parallel
Strand 4
A
58 65anti-parallel
Strand 5
A
71 78anti-parallel
Strand 6
A
86 88anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 198first strand
Strand 2
A
309 314anti-parallel
Strand 3
A
222 228anti-parallel
Strand 4
A
231 239anti-parallel
Strand 5
A
244 251anti-parallel
Strand 6
A
254 255anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
292 298first strand
Strand 2
A
284 289anti-parallel
Strand 3
A
273 280anti-parallel
Strand 4
A
208 215anti-parallel
Strand 5
A
316 322anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 11first strand
Strand 2
B
140 149anti-parallel
Strand 3
B
29 37anti-parallel
Strand 4
B
98 105anti-parallel
Strand 5
B
109 114anti-parallel
Strand 6
B
117 123anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 20first strand
Strand 2
B
133 138anti-parallel
Strand 3
B
45 50anti-parallel
Strand 4
B
58 65anti-parallel
Strand 5
B
71 78anti-parallel
Strand 6
B
81 82anti-parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 20first strand
Strand 2
B
133 138anti-parallel
Strand 3
B
45 50anti-parallel
Strand 4
B
58 65anti-parallel
Strand 5
B
71 78anti-parallel
Strand 6
B
86 88anti-parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
195 198first strand
Strand 2
B
309 314anti-parallel
Strand 3
B
222 228anti-parallel
Strand 4
B
231 239anti-parallel
Strand 5
B
244 251anti-parallel
Strand 6
B
254 255anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
292 298first strand
Strand 2
B
284 289anti-parallel
Strand 3
B
273 280anti-parallel
Strand 4
B
208 215anti-parallel
Strand 5
B
316 322anti-parallel
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