Analysis of interatomic Contacts of Structural Units in PDB entry:
3WVR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WVR entry

There are 4 chains in PDB entry 3WVR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1SER 430
B
 MSE 1SER 430
C
 MSE 1PHE 433
D
 MSE 1ALA 23
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 69 helices in PDB entry 3WVR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 31Right-handed 310
Helix 2
2
A
44 56Right-handed alpha
Helix 3
3
A
58 62Right-handed 310
Helix 4
4
A
78 83Right-handed alpha
Helix 5
5
A
84 96Right-handed alpha
Helix 6
6
A
109 119Right-handed alpha
Helix 7
7
A
121 125Right-handed 310
Helix 8
8
A
127 133Right-handed alpha
Helix 9
9
A
134 140Right-handed 310
Helix 10
10
A
141 153Right-handed alpha
Helix 11
11
A
164 178Right-handed alpha
Helix 12
12
A
190 193Right-handed 310
Helix 13
13
A
217 233Right-handed alpha
Helix 14
14
A
288 309Right-handed alpha
Helix 15
15
A
339 345Right-handed alpha
Helix 16
16
A
374 385Right-handed alpha
Helix 17
17
A
418 429Right-handed alpha
Helix 18
18
B
22 31Right-handed 310
Helix 19
19
B
44 56Right-handed alpha
Helix 20
20
B
58 62Right-handed 310
Helix 21
21
B
78 84Right-handed alpha
Helix 22
22
B
84 96Right-handed alpha
Helix 23
23
B
109 119Right-handed alpha
Helix 24
24
B
121 125Right-handed 310
Helix 25
25
B
127 133Right-handed alpha
Helix 26
26
B
134 140Right-handed 310
Helix 27
27
B
141 152Right-handed alpha
Helix 28
28
B
164 178Right-handed alpha
Helix 29
29
B
190 193Right-handed 310
Helix 30
30
B
217 233Right-handed alpha
Helix 31
31
B
288 310Right-handed alpha
Helix 32
32
B
339 345Right-handed alpha
Helix 33
33
B
374 385Right-handed alpha
Helix 34
34
B
404 408Right-handed 310
Helix 35
35
B
418 430Right-handed alpha
Helix 36
36
C
22 31Right-handed 310
Helix 37
37
C
44 56Right-handed alpha
Helix 38
38
C
58 62Right-handed 310
Helix 39
39
C
78 83Right-handed alpha
Helix 40
40
C
84 96Right-handed alpha
Helix 41
41
C
109 120Right-handed alpha
Helix 42
42
C
121 125Right-handed 310
Helix 43
43
C
127 133Right-handed alpha
Helix 44
44
C
134 140Right-handed 310
Helix 45
45
C
141 153Right-handed alpha
Helix 46
46
C
164 177Right-handed alpha
Helix 47
47
C
190 193Right-handed 310
Helix 48
48
C
217 233Right-handed alpha
Helix 49
49
C
288 310Right-handed alpha
Helix 50
50
C
339 345Right-handed alpha
Helix 51
51
C
374 385Right-handed alpha
Helix 52
52
C
418 430Right-handed alpha
Helix 53
53
D
22 31Right-handed 310
Helix 54
54
D
44 56Right-handed alpha
Helix 55
55
D
58 62Right-handed 310
Helix 56
56
D
78 83Right-handed alpha
Helix 57
57
D
84 96Right-handed alpha
Helix 58
58
D
109 119Right-handed alpha
Helix 59
59
D
121 125Right-handed 310
Helix 60
60
D
127 133Right-handed alpha
Helix 61
61
D
134 140Right-handed 310
Helix 62
62
D
141 153Right-handed alpha
Helix 63
63
D
164 178Right-handed alpha
Helix 64
64
D
190 193Right-handed 310
Helix 65
65
D
217 233Right-handed alpha
Helix 66
66
D
288 309Right-handed alpha
Helix 67
67
D
339 345Right-handed alpha
Helix 68
68
D
376 386Right-handed alpha
Helix 69
69
D
418 430Right-handed alpha
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There are 12 sheets in PDB entry 3WVR. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 65first strand
Strand 2
A
36 38parallel
Strand 3
A
2 5parallel
Strand 4
A
102 105parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 162first strand
Strand 2
A
240 244anti-parallel
Strand 3
A
182 186anti-parallel
Strand 4
A
195 199anti-parallel
Strand 5
A
211 214parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
327 334first strand
Strand 2
A
313 321anti-parallel
Strand 3
A
250 259anti-parallel
Strand 4
A
262 273anti-parallel
Strand 5
A
277 282anti-parallel
Strand 6
A
360 364anti-parallel
Strand 7
A
412 416anti-parallel
Strand 8
A
396 399anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
63 65first strand
Strand 2
B
36 38parallel
Strand 3
B
2 5parallel
Strand 4
B
102 105parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
159 162first strand
Strand 2
B
240 244anti-parallel
Strand 3
B
182 186anti-parallel
Strand 4
B
195 199anti-parallel
Strand 5
B
211 214parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
327 334first strand
Strand 2
B
313 321anti-parallel
Strand 3
B
250 259anti-parallel
Strand 4
B
262 272anti-parallel
Strand 5
B
279 282anti-parallel
Strand 6
B
360 364anti-parallel
Strand 7
B
412 416anti-parallel
Strand 8
B
396 399anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
63 65first strand
Strand 2
C
36 38parallel
Strand 3
C
2 5parallel
Strand 4
C
102 105parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
159 162first strand
Strand 2
C
240 244anti-parallel
Strand 3
C
182 186anti-parallel
Strand 4
C
195 199anti-parallel
Strand 5
C
211 214parallel
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There are 8 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
327 334first strand
Strand 2
C
313 321anti-parallel
Strand 3
C
250 259anti-parallel
Strand 4
C
262 272anti-parallel
Strand 5
C
279 282anti-parallel
Strand 6
C
360 364anti-parallel
Strand 7
C
412 416anti-parallel
Strand 8
C
396 399anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
63 65first strand
Strand 2
D
36 38parallel
Strand 3
D
2 5parallel
Strand 4
D
102 105parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
159 162first strand
Strand 2
D
240 244anti-parallel
Strand 3
D
182 186anti-parallel
Strand 4
D
195 199anti-parallel
Strand 5
D
212 214parallel
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There are 8 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
327 334first strand
Strand 2
D
313 321anti-parallel
Strand 3
D
250 259anti-parallel
Strand 4
D
262 272anti-parallel
Strand 5
D
279 282anti-parallel
Strand 6
D
360 364anti-parallel
Strand 7
D
411 416anti-parallel
Strand 8
D
396 401anti-parallel
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