Analysis of interatomic Contacts of Structural Units in PDB entry:
3WVS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WVS entry

There is 1 chain in PDB entry 3WVS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 9TRP 401
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 3WVS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
26 35Right-handed alpha
Helix 2
2
A
54 64Right-handed alpha
Helix 3
3
A
69 75Right-handed 310
Helix 4
4
A
89 93Right-handed 310
Helix 5
5
A
96 106Right-handed alpha
Helix 6
6
A
107 109Right-handed 310
Helix 7
7
A
110 115Right-handed alpha
Helix 8
8
A
117 136Right-handed alpha
Helix 9
9
A
147 159Right-handed alpha
Helix 10
10
A
161 163Right-handed 310
Helix 11
11
A
164 177Right-handed alpha
Helix 12
12
A
184 207Right-handed alpha
Helix 13
13
A
211 222Right-handed alpha
Helix 14
14
A
227 260Right-handed alpha
Helix 15
15
A
260 270Right-handed alpha
Helix 16
16
A
273 285Right-handed alpha
Helix 17
17
A
317 322Right-handed alpha
Helix 18
18
A
348 352Right-handed 310
Helix 19
19
A
355 374Right-handed alpha
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There are 4 sheets in PDB entry 3WVS. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 14first strand
Strand 2
A
39 42parallel
Strand 3
A
49 52anti-parallel
Strand 4
A
313 316parallel
Strand 5
A
295 297anti-parallel
Strand 6
A
67 68anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 140first strand
Strand 2
A
398 400anti-parallel
Strand 3
A
378 379anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 303first strand
Strand 2
A
306 308anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
384 385first strand
Strand 2
A
394 396anti-parallel
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