Analysis of interatomic Contacts of Structural Units in PDB entry:
3WWG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3WWG entry

There are 4 chains in PDB entry 3WWG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PHE 18	ASP 564
B	PHE 18	ASP 564
C	PHE 18	ASP 564
D	PHE 18	ASP 564

There are 24 helices in PDB entry 3WWG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	78	90	Right-handed 310
Helix 2	2	A	127	131	Right-handed 310
Helix 3	3	A	331	333	Right-handed 310
Helix 4	4	A	424	428	Right-handed 310
Helix 5	5	A	499	503	Right-handed 310
Helix 6	6	A	554	558	Right-handed 310
Helix 7	7	B	78	90	Right-handed 310
Helix 8	8	B	127	131	Right-handed 310
Helix 9	9	B	331	333	Right-handed 310
Helix 10	10	B	424	428	Right-handed 310
Helix 11	11	B	499	503	Right-handed 310
Helix 12	12	B	554	558	Right-handed 310
Helix 13	13	C	78	90	Right-handed 310
Helix 14	14	C	280	284	Right-handed 310
Helix 15	15	C	331	333	Right-handed 310
Helix 16	16	C	424	428	Right-handed 310
Helix 17	17	C	499	503	Right-handed 310
Helix 18	18	C	554	557	Right-handed 310
Helix 19	19	D	78	90	Right-handed 310
Helix 20	20	D	127	131	Right-handed 310
Helix 21	21	D	331	333	Right-handed 310
Helix 22	22	D	424	428	Right-handed 310
Helix 23	23	D	499	503	Right-handed 310
Helix 24	24	D	554	557	Right-handed 310

There are 40 sheets in PDB entry 3WWG. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	29	first strand
Strand 2	A	96	104	anti-parallel
Strand 3	A	75	77	anti-parallel

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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	29	first strand
Strand 2	A	96	104	anti-parallel
Strand 3	A	175	183	parallel
Strand 4	A	152	158	anti-parallel
Strand 5	A	123	126	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	36	37	first strand
Strand 2	A	49	50	parallel

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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	70	72	first strand
Strand 2	A	55	61	anti-parallel
Strand 3	A	108	114	anti-parallel
Strand 4	A	140	145	anti-parallel
Strand 5	A	134	136	anti-parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	162	165	first strand
Strand 2	A	170	173	anti-parallel

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There are 13 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	198	199	first strand
Strand 2	A	216	219	parallel
Strand 3	A	240	243	parallel
Strand 4	A	261	265	parallel
Strand 5	A	308	313	parallel
Strand 6	A	335	345	parallel
Strand 7	A	362	370	parallel
Strand 8	A	382	391	parallel
Strand 9	A	407	419	parallel
Strand 10	A	453	472	parallel
Strand 11	A	482	497	parallel
Strand 12	A	523	533	parallel
Strand 13	A	536	537	anti-parallel

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There are 13 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	204	205	first strand
Strand 2	A	222	225	parallel
Strand 3	A	247	250	parallel
Strand 4	A	269	271	parallel
Strand 5	A	316	318	parallel
Strand 6	A	335	345	parallel
Strand 7	A	362	370	parallel
Strand 8	A	382	391	parallel
Strand 9	A	407	419	parallel
Strand 10	A	453	472	parallel
Strand 11	A	482	497	parallel
Strand 12	A	523	533	parallel
Strand 13	A	560	564	parallel

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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	232	234	first strand
Strand 2	A	253	255	parallel
Strand 3	A	299	300	parallel

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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	375	376	first strand
Strand 2	A	398	399	parallel
Strand 3	A	432	434	parallel
Strand 4	A	476	478	parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	507	509	first strand
Strand 2	A	549	552	parallel

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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	29	first strand
Strand 2	B	96	104	anti-parallel
Strand 3	B	75	77	anti-parallel

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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	29	first strand
Strand 2	B	96	104	anti-parallel
Strand 3	B	175	183	parallel
Strand 4	B	152	158	anti-parallel
Strand 5	B	123	126	anti-parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	36	37	first strand
Strand 2	B	49	50	parallel

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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	70	72	first strand
Strand 2	B	55	61	anti-parallel
Strand 3	B	108	114	anti-parallel
Strand 4	B	140	145	anti-parallel
Strand 5	B	134	136	anti-parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	162	165	first strand
Strand 2	B	170	173	anti-parallel

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There are 13 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	198	199	first strand
Strand 2	B	216	219	parallel
Strand 3	B	240	243	parallel
Strand 4	B	261	265	parallel
Strand 5	B	308	313	parallel
Strand 6	B	335	345	parallel
Strand 7	B	362	370	parallel
Strand 8	B	382	391	parallel
Strand 9	B	407	419	parallel
Strand 10	B	453	472	parallel
Strand 11	B	482	497	parallel
Strand 12	B	523	533	parallel
Strand 13	B	536	537	anti-parallel

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There are 13 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	204	205	first strand
Strand 2	B	222	225	parallel
Strand 3	B	247	250	parallel
Strand 4	B	269	271	parallel
Strand 5	B	316	318	parallel
Strand 6	B	335	345	parallel
Strand 7	B	362	370	parallel
Strand 8	B	382	391	parallel
Strand 9	B	407	419	parallel
Strand 10	B	453	472	parallel
Strand 11	B	482	497	parallel
Strand 12	B	523	533	parallel
Strand 13	B	560	564	parallel

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There are 4 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	232	234	first strand
Strand 2	B	253	255	parallel
Strand 3	B	299	302	parallel
Strand 4	B	325	328	parallel

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There are 4 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	375	376	first strand
Strand 2	B	398	399	parallel
Strand 3	B	432	434	parallel
Strand 4	B	476	478	parallel

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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	507	509	first strand
Strand 2	B	549	552	parallel

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There are 3 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	29	first strand
Strand 2	C	96	104	anti-parallel
Strand 3	C	75	77	anti-parallel

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There are 5 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	29	first strand
Strand 2	C	96	104	anti-parallel
Strand 3	C	175	183	parallel
Strand 4	C	152	158	anti-parallel
Strand 5	C	123	126	anti-parallel

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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	36	38	first strand
Strand 2	C	49	51	parallel

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There are 5 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	70	72	first strand
Strand 2	C	55	61	anti-parallel
Strand 3	C	108	114	anti-parallel
Strand 4	C	141	145	anti-parallel
Strand 5	C	134	136	anti-parallel

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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	162	165	first strand
Strand 2	C	170	173	anti-parallel

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There are 13 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	198	199	first strand
Strand 2	C	216	219	parallel
Strand 3	C	240	243	parallel
Strand 4	C	261	265	parallel
Strand 5	C	308	313	parallel
Strand 6	C	335	345	parallel
Strand 7	C	362	370	parallel
Strand 8	C	383	391	parallel
Strand 9	C	407	419	parallel
Strand 10	C	453	472	parallel
Strand 11	C	482	497	parallel
Strand 12	C	523	533	parallel
Strand 13	C	536	537	anti-parallel

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There are 13 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	204	205	first strand
Strand 2	C	222	225	parallel
Strand 3	C	247	250	parallel
Strand 4	C	269	271	parallel
Strand 5	C	316	318	parallel
Strand 6	C	335	345	parallel
Strand 7	C	362	370	parallel
Strand 8	C	383	391	parallel
Strand 9	C	407	419	parallel
Strand 10	C	453	472	parallel
Strand 11	C	482	497	parallel
Strand 12	C	523	533	parallel
Strand 13	C	560	564	parallel

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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	232	234	first strand
Strand 2	C	253	255	parallel
Strand 3	C	299	302	parallel
Strand 4	C	325	328	parallel

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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	375	376	first strand
Strand 2	C	398	399	parallel
Strand 3	C	432	434	parallel
Strand 4	C	476	478	parallel

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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	507	509	first strand
Strand 2	C	549	552	parallel

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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	28	29	first strand
Strand 2	D	96	104	anti-parallel
Strand 3	D	75	77	anti-parallel

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There are 5 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	28	29	first strand
Strand 2	D	96	104	anti-parallel
Strand 3	D	175	183	parallel
Strand 4	D	152	158	anti-parallel
Strand 5	D	123	126	anti-parallel

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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	36	38	first strand
Strand 2	D	49	51	parallel

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There are 5 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	70	72	first strand
Strand 2	D	55	61	anti-parallel
Strand 3	D	108	114	anti-parallel
Strand 4	D	141	145	anti-parallel
Strand 5	D	134	136	anti-parallel

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There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	162	165	first strand
Strand 2	D	170	173	anti-parallel

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There are 13 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	198	199	first strand
Strand 2	D	216	219	parallel
Strand 3	D	240	243	parallel
Strand 4	D	261	265	parallel
Strand 5	D	308	313	parallel
Strand 6	D	335	345	parallel
Strand 7	D	362	370	parallel
Strand 8	D	382	391	parallel
Strand 9	D	407	419	parallel
Strand 10	D	453	472	parallel
Strand 11	D	482	497	parallel
Strand 12	D	523	533	parallel
Strand 13	D	536	537	anti-parallel

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There are 13 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	204	205	first strand
Strand 2	D	222	225	parallel
Strand 3	D	247	250	parallel
Strand 4	D	269	271	parallel
Strand 5	D	316	318	parallel
Strand 6	D	335	345	parallel
Strand 7	D	362	370	parallel
Strand 8	D	382	391	parallel
Strand 9	D	407	419	parallel
Strand 10	D	453	472	parallel
Strand 11	D	482	497	parallel
Strand 12	D	523	533	parallel
Strand 13	D	560	564	parallel

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There are 4 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	232	234	first strand
Strand 2	D	253	255	parallel
Strand 3	D	299	302	parallel
Strand 4	D	325	328	parallel

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There are 4 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	375	376	first strand
Strand 2	D	398	399	parallel
Strand 3	D	432	434	parallel
Strand 4	D	476	478	parallel

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There are 2 strands in AN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	507	509	first strand
Strand 2	D	549	552	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3WWG

Analysis of interatomic Contacts of Structural Units in PDB entry:
3WWG