Analysis of interatomic Contacts of Structural Units in PDB entry:
3WWJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3WWJ entry

There are 8 chains in PDB entry 3WWJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 11	ALA 151
A	PRO 153	TYR 330
B	PRO 8	ALA 151
B	PRO 153	TYR 330
C	ILE 10	ALA 151
C	PRO 153	TYR 330
D	GLU 9	ALA 151
D	PRO 153	TRP 315

There are118 helices in PDB entry 3WWJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	47	50	Right-handed 310
Helix 2	2	A	57	62	Right-handed alpha
Helix 3	3	A	79	94	Right-handed alpha
Helix 4	4	A	101	117	Right-handed alpha
Helix 5	5	A	159	166	Right-handed alpha
Helix 6	6	A	192	206	Right-handed alpha
Helix 7	7	A	245	258	Right-handed alpha
Helix 8	8	A	268	274	Right-handed alpha
Helix 9	9	A	304	318	Right-handed alpha
Helix 10	10	B	47	50	Right-handed 310
Helix 11	11	B	57	62	Right-handed alpha
Helix 12	12	B	79	94	Right-handed alpha
Helix 13	13	B	101	117	Right-handed alpha
Helix 14	14	B	139	143	Right-handed 310
Helix 15	15	B	159	166	Right-handed alpha
Helix 16	16	B	192	206	Right-handed alpha
Helix 17	17	B	245	258	Right-handed alpha
Helix 18	18	B	268	275	Right-handed alpha
Helix 19	19	B	304	318	Right-handed alpha
Helix 20	20	C	47	50	Right-handed 310
Helix 21	21	C	57	62	Right-handed alpha
Helix 22	22	C	79	94	Right-handed alpha
Helix 23	23	C	101	117	Right-handed alpha
Helix 24	24	C	139	143	Right-handed 310
Helix 25	25	C	159	166	Right-handed alpha
Helix 26	26	C	192	206	Right-handed alpha
Helix 27	27	C	245	258	Right-handed alpha
Helix 28	28	C	268	274	Right-handed alpha
Helix 29	29	C	304	317	Right-handed alpha
Helix 30	30	D	47	50	Right-handed 310
Helix 31	31	D	57	62	Right-handed alpha
Helix 32	32	D	79	94	Right-handed alpha
Helix 33	33	D	101	117	Right-handed alpha
Helix 34	34	D	139	143	Right-handed 310
Helix 35	35	D	159	166	Right-handed alpha
Helix 36	36	D	192	206	Right-handed alpha
Helix 37	37	D	245	258	Right-handed alpha
Helix 38	38	D	268	274	Right-handed alpha
Helix 39	39	D	304	318	Right-handed alpha
Helix 40	40	E	47	50	Right-handed 310
Helix 41	41	E	57	62	Right-handed alpha
Helix 42	42	E	79	94	Right-handed alpha
Helix 43	43	E	101	117	Right-handed alpha
Helix 44	44	E	139	143	Right-handed 310
Helix 45	45	E	159	166	Right-handed alpha
Helix 46	46	E	192	206	Right-handed alpha
Helix 47	47	E	245	258	Right-handed alpha
Helix 48	48	E	268	274	Right-handed alpha
Helix 49	49	E	304	318	Right-handed alpha
Helix 50	50	F	47	50	Right-handed 310
Helix 51	51	F	57	62	Right-handed alpha
Helix 52	52	F	79	94	Right-handed alpha
Helix 53	53	F	101	117	Right-handed alpha
Helix 54	54	F	159	166	Right-handed alpha
Helix 55	55	F	192	206	Right-handed alpha
Helix 56	56	F	245	258	Right-handed alpha
Helix 57	57	F	268	274	Right-handed alpha
Helix 58	58	F	304	318	Right-handed alpha
Helix 59	59	G	47	50	Right-handed 310
Helix 60	60	G	57	62	Right-handed alpha
Helix 61	61	G	79	94	Right-handed alpha
Helix 62	62	G	101	117	Right-handed alpha
Helix 63	63	G	139	143	Right-handed 310
Helix 64	64	G	159	166	Right-handed alpha
Helix 65	65	G	192	206	Right-handed alpha
Helix 66	66	G	245	259	Right-handed alpha
Helix 67	67	G	268	274	Right-handed alpha
Helix 68	68	G	304	318	Right-handed alpha
Helix 69	69	H	47	50	Right-handed 310
Helix 70	70	H	57	62	Right-handed alpha
Helix 71	71	H	79	94	Right-handed alpha
Helix 72	72	H	101	117	Right-handed alpha
Helix 73	73	H	139	143	Right-handed 310
Helix 74	74	H	159	166	Right-handed alpha
Helix 75	75	H	192	206	Right-handed alpha
Helix 76	76	H	245	258	Right-handed alpha
Helix 77	77	H	268	274	Right-handed alpha
Helix 78	78	H	304	318	Right-handed alpha
Helix 79	79	I	47	50	Right-handed 310
Helix 80	80	I	57	62	Right-handed alpha
Helix 81	81	I	79	94	Right-handed alpha
Helix 82	82	I	101	117	Right-handed alpha
Helix 83	83	I	139	143	Right-handed 310
Helix 84	84	I	159	166	Right-handed alpha
Helix 85	85	I	192	206	Right-handed alpha
Helix 86	86	I	245	258	Right-handed alpha
Helix 87	87	I	268	274	Right-handed alpha
Helix 88	88	I	304	320	Right-handed alpha
Helix 89	89	J	47	50	Right-handed 310
Helix 90	90	J	57	62	Right-handed alpha
Helix 91	91	J	79	94	Right-handed alpha
Helix 92	92	J	101	117	Right-handed alpha
Helix 93	93	J	139	143	Right-handed 310
Helix 94	94	J	159	166	Right-handed alpha
Helix 95	95	J	192	206	Right-handed alpha
Helix 96	96	J	245	258	Right-handed alpha
Helix 97	97	J	268	274	Right-handed alpha
Helix 98	98	J	304	318	Right-handed alpha
Helix 99	99	K	47	50	Right-handed 310
Helix 100	100	K	57	62	Right-handed alpha
Helix 101	101	K	79	94	Right-handed alpha
Helix 102	102	K	101	117	Right-handed alpha
Helix 103	103	K	139	143	Right-handed 310
Helix 104	104	K	159	166	Right-handed alpha
Helix 105	105	K	192	206	Right-handed alpha
Helix 106	106	K	245	258	Right-handed alpha
Helix 107	107	K	268	274	Right-handed alpha
Helix 108	108	K	304	318	Right-handed alpha
Helix 109	109	L	47	50	Right-handed 310
Helix 110	110	L	57	62	Right-handed alpha
Helix 111	111	L	79	94	Right-handed alpha
Helix 112	112	L	101	117	Right-handed alpha
Helix 113	113	L	139	143	Right-handed 310
Helix 114	114	L	159	165	Right-handed alpha
Helix 115	115	L	192	206	Right-handed alpha
Helix 116	116	L	245	258	Right-handed alpha
Helix 117	117	L	268	274	Right-handed alpha
Helix 118	118	L	304	318	Right-handed alpha

There are 42 sheets in PDB entry 3WWJ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	44	46	first strand
Strand 2	A	38	41	anti-parallel
Strand 3	A	146	153	anti-parallel
Strand 4	A	121	128	anti-parallel
Strand 5	A	65	73	anti-parallel
Strand 6	A	76	78	anti-parallel
Strand 7	A	325	327	anti-parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	52	54	first strand
Strand 2	B	52	54	anti-parallel

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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	209	211	first strand
Strand 2	A	167	171	parallel
Strand 3	A	286	293	parallel
Strand 4	A	277	282	anti-parallel
Strand 5	A	226	231	anti-parallel
Strand 6	A	234	238	anti-parallel
Strand 7	A	261	265	parallel

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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	209	211	first strand
Strand 2	A	167	171	parallel
Strand 3	A	286	293	parallel
Strand 4	A	296	297	anti-parallel

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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	44	46	first strand
Strand 2	B	38	41	anti-parallel
Strand 3	B	146	153	anti-parallel
Strand 4	B	121	128	anti-parallel
Strand 5	B	65	73	anti-parallel
Strand 6	B	76	78	anti-parallel
Strand 7	B	325	327	anti-parallel

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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	209	211	first strand
Strand 2	B	167	171	parallel
Strand 3	B	286	293	parallel
Strand 4	B	277	282	anti-parallel
Strand 5	B	226	231	anti-parallel
Strand 6	B	234	238	anti-parallel
Strand 7	B	261	265	parallel

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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	209	211	first strand
Strand 2	B	167	171	parallel
Strand 3	B	286	293	parallel
Strand 4	B	296	297	anti-parallel

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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	44	46	first strand
Strand 2	C	38	41	anti-parallel
Strand 3	C	146	153	anti-parallel
Strand 4	C	121	128	anti-parallel
Strand 5	C	65	73	anti-parallel
Strand 6	C	76	78	anti-parallel
Strand 7	C	325	327	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	52	54	first strand
Strand 2	E	52	54	anti-parallel

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There are 7 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	209	211	first strand
Strand 2	C	167	171	parallel
Strand 3	C	286	293	parallel
Strand 4	C	277	282	anti-parallel
Strand 5	C	226	231	anti-parallel
Strand 6	C	234	238	anti-parallel
Strand 7	C	261	265	parallel

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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	209	211	first strand
Strand 2	C	167	171	parallel
Strand 3	C	286	293	parallel
Strand 4	C	296	297	anti-parallel

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There are 7 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	44	46	first strand
Strand 2	D	38	41	anti-parallel
Strand 3	D	146	153	anti-parallel
Strand 4	D	121	128	anti-parallel
Strand 5	D	65	73	anti-parallel
Strand 6	D	76	78	anti-parallel
Strand 7	D	325	327	anti-parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	52	54	first strand
Strand 2	F	52	54	anti-parallel

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There are 7 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	209	211	first strand
Strand 2	D	167	171	parallel
Strand 3	D	286	293	parallel
Strand 4	D	277	282	anti-parallel
Strand 5	D	226	231	anti-parallel
Strand 6	D	234	238	anti-parallel
Strand 7	D	261	265	parallel

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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	209	211	first strand
Strand 2	D	167	171	parallel
Strand 3	D	286	293	parallel
Strand 4	D	296	297	anti-parallel

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There are 7 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	44	46	first strand
Strand 2	E	38	41	anti-parallel
Strand 3	E	146	153	anti-parallel
Strand 4	E	121	128	anti-parallel
Strand 5	E	65	73	anti-parallel
Strand 6	E	76	78	anti-parallel
Strand 7	E	325	327	anti-parallel

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There are 7 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	209	211	first strand
Strand 2	E	167	171	parallel
Strand 3	E	286	293	parallel
Strand 4	E	277	282	anti-parallel
Strand 5	E	226	231	anti-parallel
Strand 6	E	234	238	anti-parallel
Strand 7	E	262	265	parallel

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There are 4 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	209	211	first strand
Strand 2	E	167	171	parallel
Strand 3	E	286	293	parallel
Strand 4	E	296	297	anti-parallel

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There are 7 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	44	46	first strand
Strand 2	F	38	41	anti-parallel
Strand 3	F	146	153	anti-parallel
Strand 4	F	121	128	anti-parallel
Strand 5	F	65	73	anti-parallel
Strand 6	F	76	78	anti-parallel
Strand 7	F	325	327	anti-parallel

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There are 7 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	209	211	first strand
Strand 2	F	167	171	parallel
Strand 3	F	286	293	parallel
Strand 4	F	277	282	anti-parallel
Strand 5	F	226	231	anti-parallel
Strand 6	F	234	238	anti-parallel
Strand 7	F	262	265	parallel

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There are 4 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	209	211	first strand
Strand 2	F	167	171	parallel
Strand 3	F	286	293	parallel
Strand 4	F	296	297	anti-parallel

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There are 7 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	44	46	first strand
Strand 2	G	38	41	anti-parallel
Strand 3	G	146	153	anti-parallel
Strand 4	G	121	128	anti-parallel
Strand 5	G	65	73	anti-parallel
Strand 6	G	76	78	anti-parallel
Strand 7	G	325	327	anti-parallel

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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	52	54	first strand
Strand 2	H	52	54	anti-parallel

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There are 7 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	209	211	first strand
Strand 2	G	167	171	parallel
Strand 3	G	286	293	parallel
Strand 4	G	277	282	anti-parallel
Strand 5	G	226	231	anti-parallel
Strand 6	G	234	238	anti-parallel
Strand 7	G	262	265	parallel

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There are 4 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	209	211	first strand
Strand 2	G	167	171	parallel
Strand 3	G	286	293	parallel
Strand 4	G	296	297	anti-parallel

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There are 7 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	44	46	first strand
Strand 2	H	38	41	anti-parallel
Strand 3	H	146	153	anti-parallel
Strand 4	H	121	128	anti-parallel
Strand 5	H	65	73	anti-parallel
Strand 6	H	76	78	anti-parallel
Strand 7	H	325	327	anti-parallel

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There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	209	211	first strand
Strand 2	H	167	171	parallel
Strand 3	H	286	293	parallel
Strand 4	H	277	282	anti-parallel
Strand 5	H	226	231	anti-parallel
Strand 6	H	234	238	anti-parallel
Strand 7	H	261	265	parallel

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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	209	211	first strand
Strand 2	H	167	171	parallel
Strand 3	H	286	293	parallel
Strand 4	H	296	297	anti-parallel

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There are 7 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	44	46	first strand
Strand 2	I	38	41	anti-parallel
Strand 3	I	146	153	anti-parallel
Strand 4	I	121	128	anti-parallel
Strand 5	I	65	73	anti-parallel
Strand 6	I	76	78	anti-parallel
Strand 7	I	325	327	anti-parallel

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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	52	54	first strand
Strand 2	K	52	54	anti-parallel

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There are 7 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	209	211	first strand
Strand 2	I	167	171	parallel
Strand 3	I	286	293	parallel
Strand 4	I	277	282	anti-parallel
Strand 5	I	226	231	anti-parallel
Strand 6	I	234	238	anti-parallel
Strand 7	I	262	265	parallel

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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	209	211	first strand
Strand 2	I	167	171	parallel
Strand 3	I	286	293	parallel
Strand 4	I	296	297	anti-parallel

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There are 7 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	44	46	first strand
Strand 2	J	38	41	anti-parallel
Strand 3	J	146	153	anti-parallel
Strand 4	J	121	128	anti-parallel
Strand 5	J	65	73	anti-parallel
Strand 6	J	76	78	anti-parallel
Strand 7	J	325	327	anti-parallel

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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	52	54	first strand
Strand 2	L	52	54	anti-parallel

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There are 7 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	209	211	first strand
Strand 2	J	167	171	parallel
Strand 3	J	286	293	parallel
Strand 4	J	277	282	anti-parallel
Strand 5	J	226	231	anti-parallel
Strand 6	J	234	238	anti-parallel
Strand 7	J	261	265	parallel

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There are 4 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	209	211	first strand
Strand 2	J	167	171	parallel
Strand 3	J	286	293	parallel
Strand 4	J	296	297	anti-parallel

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There are 7 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	44	46	first strand
Strand 2	K	38	41	anti-parallel
Strand 3	K	146	153	anti-parallel
Strand 4	K	121	128	anti-parallel
Strand 5	K	65	73	anti-parallel
Strand 6	K	76	78	anti-parallel
Strand 7	K	325	327	anti-parallel

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There are 7 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	209	211	first strand
Strand 2	K	167	171	parallel
Strand 3	K	286	293	parallel
Strand 4	K	277	282	anti-parallel
Strand 5	K	226	231	anti-parallel
Strand 6	K	234	238	anti-parallel
Strand 7	K	262	265	parallel

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There are 4 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	209	211	first strand
Strand 2	K	167	171	parallel
Strand 3	K	286	293	parallel
Strand 4	K	296	297	anti-parallel

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There are 7 strands in AN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	45	46	first strand
Strand 2	L	38	41	anti-parallel
Strand 3	L	146	153	anti-parallel
Strand 4	L	121	128	anti-parallel
Strand 5	L	65	73	anti-parallel
Strand 6	L	76	78	anti-parallel
Strand 7	L	325	327	anti-parallel

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There are 7 strands in AO sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	209	211	first strand
Strand 2	L	167	171	parallel
Strand 3	L	286	293	parallel
Strand 4	L	277	282	anti-parallel
Strand 5	L	226	231	anti-parallel
Strand 6	L	234	238	anti-parallel
Strand 7	L	262	265	parallel

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There are 4 strands in AP sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	209	211	first strand
Strand 2	L	167	171	parallel
Strand 3	L	286	293	parallel
Strand 4	L	296	297	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3WWJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
3WWJ