Analysis of interatomic Contacts of Structural Units in PDB entry:
3WX1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WX1 entry

There are 2 chains in PDB entry 3WX1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -2PRO 427
B
 GLY -2PRO 427
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 3WX1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
338 340Right-handed 310
Helix 2
2
A
347 351Right-handed 310
Helix 3
3
A
358 360Right-handed 310
Helix 4
4
B
338 340Right-handed 310
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There are 4 sheets in PDB entry 3WX1. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
333 336first strand
Strand 2
A
323 326anti-parallel
Strand 3
A
425 426anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
362 365first strand
Strand 2
A
416 421anti-parallel
Strand 3
A
400 407anti-parallel
Strand 4
A
387 394anti-parallel
Strand 5
A
371 378anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
333 336first strand
Strand 2
B
323 326anti-parallel
Strand 3
B
425 426anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
362 365first strand
Strand 2
B
416 421anti-parallel
Strand 3
B
400 407anti-parallel
Strand 4
B
387 394anti-parallel
Strand 5
B
371 378anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il