Analysis of interatomic Contacts of Structural Units in PDB entry:
3WX5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WX5 entry

There are 2 chains in PDB entry 3WX5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 33ARG 261
B
 ASP 33ARG 261
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 3WX5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
49 52Right-handed 310
Helix 2
2
A
214 224Right-handed alpha
Helix 3
3
B
49 52Right-handed 310
Helix 4
4
B
214 224Right-handed alpha
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There are 10 sheets in PDB entry 3WX5. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 39first strand
Strand 2
A
66 71anti-parallel
Strand 3
A
77 82anti-parallel
Strand 4
A
250 260anti-parallel
Strand 5
A
118 128anti-parallel
Strand 6
A
208 213anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 48first strand
Strand 2
A
53 56anti-parallel
Strand 3
A
95 101anti-parallel
Strand 4
A
104 105anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 181first strand
Strand 2
A
184 192anti-parallel
Strand 3
A
196 202anti-parallel
Strand 4
A
157 166parallel
Strand 5
A
134 144anti-parallel
Strand 6
A
242 244anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 105first strand
Strand 2
A
95 101anti-parallel
Strand 3
A
232 239anti-parallel
Strand 4
A
113 114anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 114first strand
Strand 2
A
232 239anti-parallel
Strand 3
A
134 144anti-parallel
Strand 4
A
242 244anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 39first strand
Strand 2
B
66 71anti-parallel
Strand 3
B
77 82anti-parallel
Strand 4
B
250 260anti-parallel
Strand 5
B
118 128anti-parallel
Strand 6
B
208 213anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 48first strand
Strand 2
B
53 56anti-parallel
Strand 3
B
95 101anti-parallel
Strand 4
B
104 105anti-parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
174 181first strand
Strand 2
B
184 192anti-parallel
Strand 3
B
196 202anti-parallel
Strand 4
B
157 166parallel
Strand 5
B
134 144anti-parallel
Strand 6
B
242 244anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
104 105first strand
Strand 2
B
95 101anti-parallel
Strand 3
B
232 239anti-parallel
Strand 4
B
113 114anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
113 114first strand
Strand 2
B
232 239anti-parallel
Strand 3
B
134 144anti-parallel
Strand 4
B
242 244anti-parallel
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