Analysis of interatomic Contacts of Structural Units in PDB entry:
3WX8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WX8 entry

There are 3 chains in PDB entry 3WX8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 153
B
 MET 1GLU 153
C
 ALA 2GLU 153
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 3WX8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 5Right-handed 310
Helix 2
2
A
13 19Right-handed alpha
Helix 3
3
A
21 33Right-handed alpha
Helix 4
4
A
45 53Right-handed alpha
Helix 5
5
A
54 57Right-handed 310
Helix 6
6
A
61 70Right-handed alpha
Helix 7
7
A
83 93Right-handed alpha
Helix 8
8
A
96 100Right-handed 310
Helix 9
9
A
104 110Right-handed alpha
Helix 10
10
A
112 116Right-handed 310
Helix 11
11
A
123 135Right-handed alpha
Helix 12
12
A
136 140Right-handed 310
Helix 13
13
A
147 152Right-handed alpha
Helix 14
14
B
2 5Right-handed 310
Helix 15
15
B
13 19Right-handed alpha
Helix 16
16
B
21 33Right-handed alpha
Helix 17
17
B
45 53Right-handed alpha
Helix 18
18
B
54 57Right-handed 310
Helix 19
19
B
61 70Right-handed alpha
Helix 20
20
B
83 93Right-handed alpha
Helix 21
21
B
104 110Right-handed alpha
Helix 22
22
B
112 116Right-handed 310
Helix 23
23
B
123 135Right-handed alpha
Helix 24
24
B
136 140Right-handed 310
Helix 25
25
B
147 152Right-handed alpha
Helix 26
26
C
2 5Right-handed 310
Helix 27
27
C
13 19Right-handed alpha
Helix 28
28
C
21 33Right-handed alpha
Helix 29
29
C
45 53Right-handed alpha
Helix 30
30
C
54 57Right-handed 310
Helix 31
31
C
61 70Right-handed alpha
Helix 32
32
C
83 93Right-handed alpha
Helix 33
33
C
96 100Right-handed 310
Helix 34
34
C
104 110Right-handed alpha
Helix 35
35
C
112 116Right-handed 310
Helix 36
36
C
123 135Right-handed alpha
Helix 37
37
C
136 140Right-handed 310
Helix 38
38
C
147 152Right-handed alpha
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There are 3 sheets in PDB entry 3WX8. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 39first strand
Strand 2
A
75 80anti-parallel
Strand 3
A
7 12anti-parallel
Strand 4
A
118 120anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 39first strand
Strand 2
B
75 80anti-parallel
Strand 3
B
7 12anti-parallel
Strand 4
B
118 120anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
35 39first strand
Strand 2
C
75 80anti-parallel
Strand 3
C
7 12anti-parallel
Strand 4
C
118 120anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il