Analysis of interatomic Contacts of Structural Units in PDB entry:
3WXF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WXF entry

There are 4 chains in PDB entry 3WXF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 577LYS 886
B
 MET 1ARG 148
C
 GLY 578LYS 886
D
 MET 1ARG 148
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 3WXF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
578 582Right-handed 310
Helix 2
2
A
595 607Right-handed alpha
Helix 3
3
A
612 617Right-handed 310
Helix 4
4
A
627 639Right-handed alpha
Helix 5
5
A
639 647Right-handed alpha
Helix 6
6
A
650 665Right-handed alpha
Helix 7
7
A
676 687Right-handed alpha
Helix 8
8
A
724 736Right-handed alpha
Helix 9
9
A
773 776Right-handed 310
Helix 10
10
A
840 846Right-handed alpha
Helix 11
11
A
849 855Right-handed alpha
Helix 12
12
A
857 861Right-handed 310
Helix 13
13
A
862 863Right-handed 310
Helix 14
14
A
864 871Right-handed alpha
Helix 15
15
B
22 35Right-handed alpha
Helix 16
16
B
37 39Right-handed 310
Helix 17
17
B
56 60Right-handed 310
Helix 18
18
B
98 110Right-handed alpha
Helix 19
19
B
113 115Right-handed 310
Helix 20
20
C
578 582Right-handed 310
Helix 21
21
C
595 607Right-handed alpha
Helix 22
22
C
612 617Right-handed 310
Helix 23
23
C
627 639Right-handed alpha
Helix 24
24
C
639 647Right-handed alpha
Helix 25
25
C
650 665Right-handed alpha
Helix 26
26
C
676 687Right-handed alpha
Helix 27
27
C
724 736Right-handed alpha
Helix 28
28
C
773 776Right-handed 310
Helix 29
29
C
840 846Right-handed alpha
Helix 30
30
C
849 855Right-handed alpha
Helix 31
31
C
857 861Right-handed 310
Helix 32
32
C
862 863Right-handed 310
Helix 33
33
C
864 871Right-handed alpha
Helix 34
34
D
22 35Right-handed alpha
Helix 35
35
D
37 39Right-handed 310
Helix 36
36
D
56 60Right-handed 310
Helix 37
37
D
98 111Right-handed alpha
Helix 38
38
D
113 115Right-handed 310
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There are 12 sheets in PDB entry 3WXF. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
584 585first strand
Strand 2
A
831 838anti-parallel
Strand 3
A
815 825anti-parallel
Strand 4
A
802 807anti-parallel
Strand 5
A
788 797anti-parallel
Strand 6
A
872 878anti-parallel
Strand 7
A
746 750anti-parallel
Strand 8
A
710 711parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
584 585first strand
Strand 2
A
831 838anti-parallel
Strand 3
A
815 825anti-parallel
Strand 4
A
802 807anti-parallel
Strand 5
A
788 797anti-parallel
Strand 6
A
769 771anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
588 589first strand
Strand 2
A
648 649parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
705 707first strand
Strand 2
A
695 699anti-parallel
Strand 3
A
738 740anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 16first strand
Strand 2
B
2 7anti-parallel
Strand 3
B
66 71parallel
Strand 4
B
41 45anti-parallel
Strand 5
B
48 49anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
88 91first strand
Strand 2
B
79 82anti-parallel
Strand 3
B
142 147parallel
Strand 4
B
117 121anti-parallel
Strand 5
B
124 125anti-parallel
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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
584 585first strand
Strand 2
C
831 838anti-parallel
Strand 3
C
815 825anti-parallel
Strand 4
C
802 807anti-parallel
Strand 5
C
788 797anti-parallel
Strand 6
C
872 878anti-parallel
Strand 7
C
746 750anti-parallel
Strand 8
C
710 711parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
584 585first strand
Strand 2
C
831 838anti-parallel
Strand 3
C
815 825anti-parallel
Strand 4
C
802 807anti-parallel
Strand 5
C
788 797anti-parallel
Strand 6
C
769 771anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
588 589first strand
Strand 2
C
648 649parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
704 707first strand
Strand 2
C
695 699anti-parallel
Strand 3
C
738 740anti-parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
12 16first strand
Strand 2
D
2 7anti-parallel
Strand 3
D
66 71parallel
Strand 4
D
41 45anti-parallel
Strand 5
D
48 49anti-parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
88 93first strand
Strand 2
D
77 82anti-parallel
Strand 3
D
142 147parallel
Strand 4
D
117 121anti-parallel
Strand 5
D
124 125anti-parallel
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