Analysis of interatomic Contacts of Structural Units in PDB entry:
3WY0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WY0 entry

There are 2 chains in PDB entry 3WY0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 14PRO 389
B
 GLN 13PRO 389
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 3WY0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
30 42Right-handed alpha
Helix 2
2
A
45 56Right-handed alpha
Helix 3
3
A
71 75Right-handed 310
Helix 4
4
A
81 109Right-handed alpha
Helix 5
5
A
111 115Right-handed 310
Helix 6
6
A
130 140Right-handed alpha
Helix 7
7
A
153 155Right-handed 310
Helix 8
8
A
156 176Right-handed alpha
Helix 9
9
A
188 191Right-handed 310
Helix 10
10
A
192 204Right-handed alpha
Helix 11
11
A
208 213Right-handed alpha
Helix 12
12
A
270 289Right-handed alpha
Helix 13
13
A
296 305Right-handed 310
Helix 14
14
A
313 324Right-handed alpha
Helix 15
15
A
331 339Right-handed alpha
Helix 16
16
A
344 346Right-handed 310
Helix 17
17
A
347 361Right-handed alpha
Helix 18
18
B
30 42Right-handed alpha
Helix 19
19
B
45 56Right-handed alpha
Helix 20
20
B
71 75Right-handed 310
Helix 21
21
B
81 109Right-handed alpha
Helix 22
22
B
111 115Right-handed 310
Helix 23
23
B
130 140Right-handed alpha
Helix 24
24
B
153 155Right-handed 310
Helix 25
25
B
156 175Right-handed alpha
Helix 26
26
B
188 191Right-handed 310
Helix 27
27
B
192 204Right-handed alpha
Helix 28
28
B
208 213Right-handed alpha
Helix 29
29
B
270 289Right-handed alpha
Helix 30
30
B
296 305Right-handed 310
Helix 31
31
B
313 324Right-handed alpha
Helix 32
32
B
331 339Right-handed alpha
Helix 33
33
B
344 346Right-handed 310
Helix 34
34
B
347 362Right-handed alpha
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There are 7 sheets in PDB entry 3WY0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 150first strand
Strand 2
A
117 121parallel
Strand 3
A
180 187parallel
Strand 4
A
216 223anti-parallel
Strand 5
A
15 24anti-parallel
Strand 6
A
237 246anti-parallel
Strand 7
A
380 387anti-parallel
Strand 8
A
369 376anti-parallel
Strand 9
A
306 309parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 28first strand
Strand 2
A
62 65anti-parallel
Strand 3
A
340 341parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
254 259first strand
Strand 2
A
262 267anti-parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
146 150first strand
Strand 2
B
117 121parallel
Strand 3
B
180 187parallel
Strand 4
B
216 223anti-parallel
Strand 5
B
15 24anti-parallel
Strand 6
B
237 242anti-parallel
Strand 7
B
380 387anti-parallel
Strand 8
B
245 246anti-parallel
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There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
146 150first strand
Strand 2
B
117 121parallel
Strand 3
B
180 187parallel
Strand 4
B
216 223anti-parallel
Strand 5
B
15 24anti-parallel
Strand 6
B
237 242anti-parallel
Strand 7
B
380 387anti-parallel
Strand 8
B
369 376anti-parallel
Strand 9
B
306 309parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 28first strand
Strand 2
B
62 65anti-parallel
Strand 3
B
340 341parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
254 259first strand
Strand 2
B
262 267anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il