Analysis of interatomic Contacts of Structural Units in PDB entry:
3WY3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WY3 entry

There are 2 chains in PDB entry 3WY3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 4ALA 538
B
 ASN 4ALA 538
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 45 helices in PDB entry 3WY3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 21Right-handed 310
Helix 2
2
A
31 38Right-handed alpha
Helix 3
3
A
38 45Right-handed alpha
Helix 4
4
A
79 93Right-handed alpha
Helix 5
5
A
110 117Right-handed alpha
Helix 6
6
A
177 193Right-handed alpha
Helix 7
7
A
203 207Right-handed 310
Helix 8
8
A
233 238Right-handed 310
Helix 9
9
A
247 262Right-handed alpha
Helix 10
10
A
276 286Right-handed alpha
Helix 11
11
A
287 289Right-handed 310
Helix 12
12
A
305 318Right-handed alpha
Helix 13
13
A
336 341Right-handed alpha
Helix 14
14
A
349 361Right-handed alpha
Helix 15
15
A
370 374Right-handed 310
Helix 16
16
A
381 385Right-handed 310
Helix 17
17
A
387 391Right-handed 310
Helix 18
18
A
400 404Right-handed 310
Helix 19
19
A
412 417Right-handed 310
Helix 20
20
A
427 433Right-handed 310
Helix 21
21
A
434 439Right-handed alpha
Helix 22
22
A
444 458Right-handed alpha
Helix 23
23
A
460 465Right-handed alpha
Helix 24
24
B
17 21Right-handed 310
Helix 25
25
B
31 45Right-handed alpha
Helix 26
26
B
79 93Right-handed alpha
Helix 27
27
B
110 117Right-handed alpha
Helix 28
28
B
177 193Right-handed alpha
Helix 29
29
B
203 207Right-handed 310
Helix 30
30
B
233 238Right-handed 310
Helix 31
31
B
247 262Right-handed alpha
Helix 32
32
B
276 286Right-handed alpha
Helix 33
33
B
287 289Right-handed 310
Helix 34
34
B
305 318Right-handed alpha
Helix 35
35
B
336 341Right-handed alpha
Helix 36
36
B
349 361Right-handed alpha
Helix 37
37
B
370 374Right-handed 310
Helix 38
38
B
381 385Right-handed 310
Helix 39
39
B
387 391Right-handed 310
Helix 40
40
B
400 404Right-handed 310
Helix 41
41
B
412 417Right-handed 310
Helix 42
42
B
427 432Right-handed alpha
Helix 43
43
B
434 440Right-handed alpha
Helix 44
44
B
444 458Right-handed alpha
Helix 45
45
B
460 465Right-handed alpha
Back to top of page

There are 10 sheets in PDB entry 3WY3. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 295first strand
Strand 2
A
267 271parallel
Strand 3
A
198 201parallel
Strand 4
A
96 101parallel
Strand 5
A
49 52parallel
Strand 6
A
12 16parallel
Strand 7
A
364 368parallel
Strand 8
A
326 328parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 57first strand
Strand 2
A
69 73anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 131first strand
Strand 2
A
160 163anti-parallel
Strand 3
A
152 155anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
466 469first strand
Strand 2
A
477 483anti-parallel
Strand 3
A
486 492anti-parallel
Strand 4
A
532 537anti-parallel
Strand 5
A
507 511anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
499 502first strand
Strand 2
A
524 527anti-parallel
Strand 3
A
519 521anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
293 295first strand
Strand 2
B
267 271parallel
Strand 3
B
198 201parallel
Strand 4
B
96 101parallel
Strand 5
B
49 52parallel
Strand 6
B
12 16parallel
Strand 7
B
364 368parallel
Strand 8
B
326 328parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 57first strand
Strand 2
B
69 73anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
130 131first strand
Strand 2
B
160 163anti-parallel
Strand 3
B
152 155anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
466 469first strand
Strand 2
B
477 483anti-parallel
Strand 3
B
486 492anti-parallel
Strand 4
B
532 537anti-parallel
Strand 5
B
507 511anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
499 502first strand
Strand 2
B
524 527anti-parallel
Strand 3
B
519 521anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il