Analysis of interatomic Contacts of Structural Units in PDB entry:
3WY4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WY4 entry

There are 2 chains in PDB entry 3WY4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 4ALA 538
B
 ASN 4ALA 538
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 3WY4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 21Right-handed 310
Helix 2
2
A
31 45Right-handed alpha
Helix 3
3
A
79 93Right-handed alpha
Helix 4
4
A
110 117Right-handed alpha
Helix 5
5
A
177 195Right-handed alpha
Helix 6
6
A
203 207Right-handed 310
Helix 7
7
A
233 238Right-handed 310
Helix 8
8
A
246 262Right-handed alpha
Helix 9
9
A
276 285Right-handed alpha
Helix 10
10
A
305 319Right-handed alpha
Helix 11
11
A
336 341Right-handed alpha
Helix 12
12
A
348 361Right-handed alpha
Helix 13
13
A
381 385Right-handed 310
Helix 14
14
A
387 391Right-handed 310
Helix 15
15
A
400 404Right-handed 310
Helix 16
16
A
412 417Right-handed 310
Helix 17
17
A
427 433Right-handed alpha
Helix 18
18
A
434 439Right-handed alpha
Helix 19
19
A
444 458Right-handed alpha
Helix 20
20
A
460 465Right-handed alpha
Helix 21
21
B
31 45Right-handed alpha
Helix 22
22
B
80 93Right-handed alpha
Helix 23
23
B
110 117Right-handed alpha
Helix 24
24
B
177 195Right-handed alpha
Helix 25
25
B
203 207Right-handed 310
Helix 26
26
B
233 238Right-handed 310
Helix 27
27
B
247 262Right-handed alpha
Helix 28
28
B
276 286Right-handed alpha
Helix 29
29
B
287 289Right-handed 310
Helix 30
30
B
305 319Right-handed alpha
Helix 31
31
B
349 359Right-handed alpha
Helix 32
32
B
445 458Right-handed alpha
Helix 33
33
B
460 465Right-handed alpha
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There are 9 sheets in PDB entry 3WY4. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 295first strand
Strand 2
A
267 271parallel
Strand 3
A
198 201parallel
Strand 4
A
96 101parallel
Strand 5
A
49 52parallel
Strand 6
A
12 16parallel
Strand 7
A
364 368parallel
Strand 8
A
326 328parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 57first strand
Strand 2
A
69 73anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 131first strand
Strand 2
A
160 163anti-parallel
Strand 3
A
152 155anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
466 469first strand
Strand 2
A
477 483anti-parallel
Strand 3
A
486 492anti-parallel
Strand 4
A
532 537anti-parallel
Strand 5
A
507 511anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
499 502first strand
Strand 2
A
524 527anti-parallel
Strand 3
A
519 521anti-parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
293 295first strand
Strand 2
B
267 271parallel
Strand 3
B
198 201parallel
Strand 4
B
96 101parallel
Strand 5
B
49 52parallel
Strand 6
B
12 16parallel
Strand 7
B
364 367parallel
Strand 8
B
326 328parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
130 131first strand
Strand 2
B
160 163anti-parallel
Strand 3
B
152 155anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
466 469first strand
Strand 2
B
477 483anti-parallel
Strand 3
B
486 492anti-parallel
Strand 4
B
532 537anti-parallel
Strand 5
B
507 511anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
499 502first strand
Strand 2
B
524 527anti-parallel
Strand 3
B
519 521anti-parallel
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