Analysis of interatomic Contacts of Structural Units in PDB entry:
3WYI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WYI entry

There is 1 chain in PDB entry 3WYI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 17GLN 247
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 11 helices in PDB entry 3WYI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 42Right-handed alpha
Helix 2
2
A
45 68Right-handed alpha
Helix 3
3
A
85 90Right-handed alpha
Helix 4
4
A
91 95Right-handed 310
Helix 5
5
A
96 110Right-handed alpha
Helix 6
6
A
124 139Right-handed alpha
Helix 7
7
A
153 172Right-handed alpha
Helix 8
8
A
175 179Right-handed 310
Helix 9
9
A
180 186Right-handed alpha
Helix 10
10
A
227 231Right-handed 310
Helix 11
11
A
232 246Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 3WYI.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 118first strand
Strand 2
A
145 150parallel
Strand 3
A
71 76parallel
Strand 4
A
27 32parallel
Strand 5
A
198 201parallel
Strand 6
A
220 223parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il