Analysis of interatomic Contacts of Structural Units in PDB entry:
3WZ0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WZ0 entry

There are 4 chains in PDB entry 3WZ0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 TYR 12VAL 217
F
 TYR 12VAL 217
C
 LYS 15TRP 119
A
 ASN 16TRP 119
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 3WZ0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
E
20 31Right-handed alpha
Helix 2
2
E
47 63Right-handed alpha
Helix 3
3
E
73 84Right-handed alpha
Helix 4
4
E
95 105Right-handed alpha
Helix 5
5
E
123 134Right-handed alpha
Helix 6
6
E
141 147Right-handed alpha
Helix 7
7
E
148 169Right-handed alpha
Helix 8
8
E
181 185Right-handed 310
Helix 9
9
E
187 199Right-handed alpha
Helix 10
10
E
201 208Right-handed alpha
Helix 11
11
E
210 217Right-handed alpha
Helix 12
12
F
20 31Right-handed alpha
Helix 13
13
F
47 63Right-handed alpha
Helix 14
14
F
73 84Right-handed alpha
Helix 15
15
F
96 105Right-handed alpha
Helix 16
16
F
123 134Right-handed alpha
Helix 17
17
F
141 147Right-handed alpha
Helix 18
18
F
148 169Right-handed alpha
Helix 19
19
F
181 185Right-handed 310
Helix 20
20
F
187 199Right-handed alpha
Helix 21
21
F
201 208Right-handed alpha
Helix 22
22
F
210 217Right-handed alpha
Helix 23
23
C
30 46Right-handed alpha
Helix 24
24
C
46 55Right-handed alpha
Helix 25
25
C
76 86Right-handed alpha
Helix 26
26
C
105 113Right-handed alpha
Helix 27
27
A
30 46Right-handed alpha
Helix 28
28
A
46 55Right-handed alpha
Helix 29
29
A
73 75Right-handed 310
Helix 30
30
A
76 86Right-handed alpha
Helix 31
31
A
105 113Right-handed alpha
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There are 4 sheets in PDB entry 3WZ0. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
14 18first strand
Strand 2
E
33 42parallel
Strand 3
E
65 71parallel
Strand 4
E
88 92parallel
Strand 5
E
109 111parallel
Strand 6
E
136 140parallel
Strand 7
E
173 176parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
14 18first strand
Strand 2
F
33 42parallel
Strand 3
F
65 71parallel
Strand 4
F
88 92parallel
Strand 5
F
109 111parallel
Strand 6
F
136 140parallel
Strand 7
F
173 176parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
57 62first strand
Strand 2
C
67 73anti-parallel
Strand 3
C
16 25anti-parallel
Strand 4
C
93 103anti-parallel
Strand 5
C
89 90anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 62first strand
Strand 2
A
67 72anti-parallel
Strand 3
A
17 25anti-parallel
Strand 4
A
95 103anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il