Analysis of interatomic Contacts of Structural Units in PDB entry:
3WZL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WZL entry

There are 3 chains in PDB entry 3WZL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 264
B
 MET 1LEU 264
C
 MET 1LEU 264
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 46 helices in PDB entry 3WZL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
35 38Right-handed 310
Helix 2
2
A
39 48Right-handed alpha
Helix 3
3
A
61 65Right-handed 310
Helix 4
4
A
68 72Right-handed 310
Helix 5
5
A
76 91Right-handed alpha
Helix 6
6
A
102 115Right-handed alpha
Helix 7
7
A
132 137Right-handed alpha
Helix 8
8
A
138 141Right-handed 310
Helix 9
9
A
142 157Right-handed alpha
Helix 10
10
A
161 167Right-handed alpha
Helix 11
11
A
169 187Right-handed alpha
Helix 12
12
A
191 195Right-handed 310
Helix 13
13
A
199 204Right-handed alpha
Helix 14
14
A
217 232Right-handed alpha
Helix 15
15
A
243 248Right-handed alpha
Helix 16
16
A
248 263Right-handed alpha
Helix 17
17
B
35 38Right-handed 310
Helix 18
18
B
39 49Right-handed alpha
Helix 19
19
B
61 65Right-handed 310
Helix 20
20
B
68 72Right-handed 310
Helix 21
21
B
76 91Right-handed alpha
Helix 22
22
B
102 115Right-handed alpha
Helix 23
23
B
132 137Right-handed alpha
Helix 24
24
B
138 141Right-handed 310
Helix 25
25
B
142 158Right-handed alpha
Helix 26
26
B
161 167Right-handed alpha
Helix 27
27
B
169 187Right-handed alpha
Helix 28
28
B
191 195Right-handed 310
Helix 29
29
B
199 204Right-handed alpha
Helix 30
30
B
217 231Right-handed alpha
Helix 31
31
B
243 248Right-handed alpha
Helix 32
32
B
248 264Right-handed alpha
Helix 33
33
C
39 48Right-handed alpha
Helix 34
34
C
68 72Right-handed 310
Helix 35
35
C
76 90Right-handed alpha
Helix 36
36
C
102 115Right-handed alpha
Helix 37
37
C
132 137Right-handed alpha
Helix 38
38
C
145 157Right-handed alpha
Helix 39
39
C
165 168Right-handed 310
Helix 40
40
C
169 187Right-handed alpha
Helix 41
41
C
199 204Right-handed alpha
Helix 42
42
C
217 222Right-handed alpha
Helix 43
43
C
224 229Right-handed alpha
Helix 44
44
C
230 232Right-handed 310
Helix 45
45
C
243 248Right-handed alpha
Helix 46
46
C
249 262Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 3WZL. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 8first strand
Strand 2
A
14 20anti-parallel
Strand 3
A
52 56anti-parallel
Strand 4
A
25 29parallel
Strand 5
A
96 101parallel
Strand 6
A
119 125parallel
Strand 7
A
208 213parallel
Strand 8
A
234 238parallel
Back to list of sheets
Back to top of page

There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 8first strand
Strand 2
B
14 20anti-parallel
Strand 3
B
52 56anti-parallel
Strand 4
B
25 29parallel
Strand 5
B
96 101parallel
Strand 6
B
119 125parallel
Strand 7
B
208 213parallel
Strand 8
B
234 238parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
17 20first strand
Strand 2
C
52 56anti-parallel
Strand 3
C
25 29parallel
Strand 4
C
96 101parallel
Strand 5
C
124 125parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
209 212first strand
Strand 2
C
234 237parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il