Analysis of interatomic Contacts of Structural Units in PDB entry:
3WZT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WZT entry

There are 6 chains in PDB entry 3WZT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASN 673GLN 830
B
VAL 672GLN 830
C
ASN 679GLN 830
D
LYS 674GLN 830
E
ASP 681GLU 826
F
VAL 686VAL 827
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 3WZT. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
673 678Right-handed alpha
Helix 2
2
A
679 684Right-handed alpha
Helix 3
3
A
711 728Right-handed alpha
Helix 4
4
A
746 756Right-handed alpha
Helix 5
5
A
757 762Right-handed 310
Helix 6
6
A
765 775Right-handed alpha
Helix 7
7
A
781 795Right-handed alpha
Helix 8
8
A
821 830Right-handed alpha
Helix 9
9
B
673 678Right-handed alpha
Helix 10
10
B
679 684Right-handed alpha
Helix 11
11
B
711 728Right-handed alpha
Helix 12
12
B
746 756Right-handed alpha
Helix 13
13
B
757 762Right-handed 310
Helix 14
14
B
765 775Right-handed alpha
Helix 15
15
B
781 795Right-handed alpha
Helix 16
16
B
821 830Right-handed alpha
Helix 17
17
C
680 684Right-handed alpha
Helix 18
18
C
711 728Right-handed alpha
Helix 19
19
C
746 756Right-handed alpha
Helix 20
20
C
757 762Right-handed 310
Helix 21
21
C
765 775Right-handed alpha
Helix 22
22
C
781 795Right-handed alpha
Helix 23
23
C
821 830Right-handed alpha
Helix 24
24
D
679 684Right-handed alpha
Helix 25
25
D
711 728Right-handed alpha
Helix 26
26
D
746 756Right-handed alpha
Helix 27
27
D
757 762Right-handed 310
Helix 28
28
D
765 775Right-handed alpha
Helix 29
29
D
781 795Right-handed alpha
Helix 30
30
D
821 830Right-handed alpha
Helix 31
31
E
682 686Right-handed 310
Helix 32
32
E
711 728Right-handed alpha
Helix 33
33
E
747 753Right-handed alpha
Helix 34
34
E
781 794Right-handed alpha
Helix 35
35
E
822 826Right-handed alpha
Helix 36
36
F
711 727Right-handed alpha
Helix 37
37
F
746 756Right-handed alpha
Helix 38
38
F
766 773Right-handed alpha
Helix 39
39
F
781 795Right-handed alpha
Helix 40
40
F
822 827Right-handed alpha
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There are 6 sheets in PDB entry 3WZT. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
688 689first strand
Strand 2
A
731 737anti-parallel
Strand 3
A
701 707parallel
Strand 4
A
803 806anti-parallel
Strand 5
A
809 811anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
688 689first strand
Strand 2
B
731 737anti-parallel
Strand 3
B
701 707parallel
Strand 4
B
803 806anti-parallel
Strand 5
B
809 811anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
688 689first strand
Strand 2
C
731 737anti-parallel
Strand 3
C
701 707parallel
Strand 4
C
803 806anti-parallel
Strand 5
C
809 811anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
688 689first strand
Strand 2
D
731 737anti-parallel
Strand 3
D
701 707parallel
Strand 4
D
803 806anti-parallel
Strand 5
D
809 811anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
734 737first strand
Strand 2
E
704 707parallel
Strand 3
E
803 806anti-parallel
Strand 4
E
809 811anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
688 689first strand
Strand 2
F
732 737anti-parallel
Strand 3
F
702 707parallel
Strand 4
F
803 806anti-parallel
Strand 5
F
809 811anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il