Analysis of interatomic Contacts of Structural Units in PDB entry:
3X0V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3X0V entry

There are 2 chains in PDB entry 3X0V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 4LEU 512
B
 GLU 4LEU 512
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 3X0V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 30Right-handed alpha
Helix 2
2
A
72 74Right-handed 310
Helix 3
3
A
75 85Right-handed alpha
Helix 4
4
A
119 123Right-handed 310
Helix 5
5
A
127 132Right-handed alpha
Helix 6
6
A
133 152Right-handed alpha
Helix 7
7
A
152 161Right-handed alpha
Helix 8
8
A
162 164Right-handed 310
Helix 9
9
A
167 175Right-handed alpha
Helix 10
10
A
185 197Right-handed alpha
Helix 11
11
A
200 204Right-handed 310
Helix 12
12
A
205 217Right-handed alpha
Helix 13
13
A
231 242Right-handed alpha
Helix 14
14
A
287 293Right-handed alpha
Helix 15
15
A
296 300Right-handed 310
Helix 16
16
A
302 312Right-handed alpha
Helix 17
17
A
327 332Right-handed alpha
Helix 18
18
A
372 380Right-handed alpha
Helix 19
19
A
393 407Right-handed alpha
Helix 20
20
A
412 419Right-handed alpha
Helix 21
21
A
430 432Right-handed 310
Helix 22
22
A
445 450Right-handed alpha
Helix 23
23
A
450 455Right-handed alpha
Helix 24
24
A
458 461Right-handed 310
Helix 25
25
A
467 471Right-handed 310
Helix 26
26
A
476 495Right-handed alpha
Helix 27
27
A
497 509Right-handed alpha
Helix 28
28
B
16 30Right-handed alpha
Helix 29
29
B
72 74Right-handed 310
Helix 30
30
B
75 85Right-handed alpha
Helix 31
31
B
119 123Right-handed 310
Helix 32
32
B
127 132Right-handed alpha
Helix 33
33
B
133 152Right-handed alpha
Helix 34
34
B
152 161Right-handed alpha
Helix 35
35
B
162 164Right-handed 310
Helix 36
36
B
167 175Right-handed alpha
Helix 37
37
B
185 197Right-handed alpha
Helix 38
38
B
200 204Right-handed 310
Helix 39
39
B
205 217Right-handed alpha
Helix 40
40
B
231 241Right-handed alpha
Helix 41
41
B
287 293Right-handed alpha
Helix 42
42
B
296 300Right-handed 310
Helix 43
43
B
302 312Right-handed alpha
Helix 44
44
B
327 332Right-handed alpha
Helix 45
45
B
372 380Right-handed alpha
Helix 46
46
B
393 407Right-handed alpha
Helix 47
47
B
412 419Right-handed alpha
Helix 48
48
B
430 432Right-handed 310
Helix 49
49
B
445 450Right-handed alpha
Helix 50
50
B
450 455Right-handed alpha
Helix 51
51
B
467 471Right-handed 310
Helix 52
52
B
476 495Right-handed alpha
Helix 53
53
B
497 509Right-handed alpha
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There are 14 sheets in PDB entry 3X0V. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 39first strand
Strand 2
A
8 13parallel
Strand 3
A
281 284parallel
Strand 4
A
463 465parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 53first strand
Strand 2
A
61 63anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 70first strand
Strand 2
A
224 227anti-parallel
Strand 3
A
89 92anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 107first strand
Strand 2
A
101 103anti-parallel
Strand 3
A
340 343parallel
Strand 4
A
349 351anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
252 257first strand
Strand 2
A
267 271anti-parallel
Strand 3
A
274 279anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
314 315first strand
Strand 2
A
439 440anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
363 371first strand
Strand 2
A
317 324anti-parallel
Strand 3
A
420 428anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 39first strand
Strand 2
B
8 13parallel
Strand 3
B
281 284parallel
Strand 4
B
463 465parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 53first strand
Strand 2
B
61 63anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 70first strand
Strand 2
B
224 227anti-parallel
Strand 3
B
89 92anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
106 107first strand
Strand 2
B
101 103anti-parallel
Strand 3
B
340 343parallel
Strand 4
B
349 351anti-parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
252 257first strand
Strand 2
B
267 271anti-parallel
Strand 3
B
274 279anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
314 315first strand
Strand 2
B
439 440anti-parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
363 371first strand
Strand 2
B
317 324anti-parallel
Strand 3
B
420 428anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il