Analysis of interatomic Contacts of Structural Units in PDB entry:
3X37


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3X37 entry

There are 2 chains in PDB entry 3X37 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 4LEU 116
B
 MSE 1ILE 130
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 3X37. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
30 32Right-handed 310
Helix 2
2
A
93 97Right-handed 310
Helix 3
3
A
99 103Right-handed 310
Helix 4
4
A
104 109Right-handed alpha
Helix 5
5
A
110 113Right-handed 310
Helix 6
6
B
13 17Right-handed 310
Helix 7
7
B
51 53Right-handed 310
Helix 8
8
B
54 59Right-handed 310
Helix 9
9
B
70 81Right-handed alpha
Helix 10
10
B
122 128Right-handed alpha
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There are 2 sheets in PDB entry 3X37. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 10first strand
Strand 2
A
48 52anti-parallel
Strand 3
A
57 62anti-parallel
Strand 4
A
67 72anti-parallel
Strand 5
A
25 28anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 11first strand
Strand 2
B
20 28anti-parallel
Strand 3
B
62 67anti-parallel
Strand 4
B
111 118anti-parallel
Strand 5
B
101 108anti-parallel
Strand 6
B
86 92anti-parallel
Strand 7
B
38 49anti-parallel
Strand 8
B
3 11parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il