Analysis of interatomic Contacts of Structural Units in PDB entry:
3X38


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3X38 entry

There are 4 chains in PDB entry 3X38 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 180SER 257
B
 LYS 180LEU 258
C
 LYS 180LEU 258
D
 LYS 180LYS 256
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 3X38. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
181 199Right-handed alpha
Helix 2
2
A
207 223Right-handed alpha
Helix 3
3
A
223 232Right-handed alpha
Helix 4
4
A
239 255Right-handed alpha
Helix 5
5
B
181 199Right-handed alpha
Helix 6
6
B
207 223Right-handed alpha
Helix 7
7
B
223 232Right-handed alpha
Helix 8
8
B
239 255Right-handed alpha
Helix 9
9
C
181 199Right-handed alpha
Helix 10
10
C
207 223Right-handed alpha
Helix 11
11
C
223 232Right-handed alpha
Helix 12
12
C
239 256Right-handed alpha
Helix 13
13
D
181 199Right-handed alpha
Helix 14
14
D
206 223Right-handed alpha
Helix 15
15
D
223 232Right-handed alpha
Helix 16
16
D
239 255Right-handed alpha
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There are no sheets in PDB entry 3X38
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il