Analysis of interatomic Contacts of Structural Units in PDB entry:
3X3H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3X3H entry

There are 8 chains in PDB entry 3X3H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1ALA 258
B
MET 1ALA 258
C
MET 1ALA 258
D
MET 1ALA 258
E
MET 1ALA 258
F
MET 1ALA 258
G
MET 1ALA 258
H
MET 1ALA 258
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are112 helices in PDB entry 3X3H. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
15 20Right-handed 310
Helix 2
2
A
21 29Right-handed alpha
Helix 3
3
A
47 51Right-handed 310
Helix 4
4
A
53 58Right-handed alpha
Helix 5
5
A
58 68Right-handed alpha
Helix 6
6
A
82 94Right-handed alpha
Helix 7
7
A
115 125Right-handed alpha
Helix 8
8
A
150 157Right-handed alpha
Helix 9
9
A
163 174Right-handed alpha
Helix 10
10
A
180 186Right-handed alpha
Helix 11
11
A
194 198Right-handed 310
Helix 12
12
A
212 223Right-handed alpha
Helix 13
13
A
237 242Right-handed alpha
Helix 14
14
A
242 258Right-handed alpha
Helix 15
15
B
15 20Right-handed 310
Helix 16
16
B
21 29Right-handed alpha
Helix 17
17
B
47 51Right-handed 310
Helix 18
18
B
53 58Right-handed alpha
Helix 19
19
B
58 68Right-handed alpha
Helix 20
20
B
82 94Right-handed alpha
Helix 21
21
B
115 125Right-handed alpha
Helix 22
22
B
150 157Right-handed alpha
Helix 23
23
B
163 174Right-handed alpha
Helix 24
24
B
180 186Right-handed alpha
Helix 25
25
B
194 198Right-handed 310
Helix 26
26
B
212 223Right-handed alpha
Helix 27
27
B
237 242Right-handed alpha
Helix 28
28
B
242 258Right-handed alpha
Helix 29
29
C
15 20Right-handed 310
Helix 30
30
C
21 29Right-handed alpha
Helix 31
31
C
47 51Right-handed 310
Helix 32
32
C
53 58Right-handed alpha
Helix 33
33
C
58 68Right-handed alpha
Helix 34
34
C
82 94Right-handed alpha
Helix 35
35
C
115 125Right-handed alpha
Helix 36
36
C
150 157Right-handed alpha
Helix 37
37
C
163 174Right-handed alpha
Helix 38
38
C
180 186Right-handed alpha
Helix 39
39
C
194 198Right-handed 310
Helix 40
40
C
212 223Right-handed alpha
Helix 41
41
C
237 242Right-handed alpha
Helix 42
42
C
242 258Right-handed alpha
Helix 43
43
D
15 20Right-handed 310
Helix 44
44
D
21 29Right-handed alpha
Helix 45
45
D
47 51Right-handed 310
Helix 46
46
D
53 58Right-handed alpha
Helix 47
47
D
58 68Right-handed alpha
Helix 48
48
D
82 94Right-handed alpha
Helix 49
49
D
115 125Right-handed alpha
Helix 50
50
D
150 157Right-handed alpha
Helix 51
51
D
163 174Right-handed alpha
Helix 52
52
D
180 186Right-handed alpha
Helix 53
53
D
194 198Right-handed 310
Helix 54
54
D
212 223Right-handed alpha
Helix 55
55
D
237 242Right-handed alpha
Helix 56
56
D
242 258Right-handed alpha
Helix 57
57
E
15 20Right-handed 310
Helix 58
58
E
21 29Right-handed alpha
Helix 59
59
E
47 51Right-handed 310
Helix 60
60
E
53 58Right-handed alpha
Helix 61
61
E
58 68Right-handed alpha
Helix 62
62
E
82 94Right-handed alpha
Helix 63
63
E
115 125Right-handed alpha
Helix 64
64
E
150 157Right-handed alpha
Helix 65
65
E
163 174Right-handed alpha
Helix 66
66
E
180 186Right-handed alpha
Helix 67
67
E
194 198Right-handed 310
Helix 68
68
E
212 223Right-handed alpha
Helix 69
69
E
237 242Right-handed alpha
Helix 70
70
E
242 258Right-handed alpha
Helix 71
71
F
15 20Right-handed 310
Helix 72
72
F
21 29Right-handed alpha
Helix 73
73
F
47 51Right-handed 310
Helix 74
74
F
53 58Right-handed alpha
Helix 75
75
F
58 68Right-handed alpha
Helix 76
76
F
82 94Right-handed alpha
Helix 77
77
F
115 125Right-handed alpha
Helix 78
78
F
150 157Right-handed alpha
Helix 79
79
F
163 174Right-handed alpha
Helix 80
80
F
180 186Right-handed alpha
Helix 81
81
F
194 198Right-handed 310
Helix 82
82
F
212 223Right-handed alpha
Helix 83
83
F
237 242Right-handed alpha
Helix 84
84
F
242 258Right-handed alpha
Helix 85
85
G
15 20Right-handed 310
Helix 86
86
G
21 29Right-handed alpha
Helix 87
87
G
47 51Right-handed 310
Helix 88
88
G
53 58Right-handed alpha
Helix 89
89
G
58 68Right-handed alpha
Helix 90
90
G
82 93Right-handed alpha
Helix 91
91
G
115 125Right-handed alpha
Helix 92
92
G
150 157Right-handed alpha
Helix 93
93
G
163 174Right-handed alpha
Helix 94
94
G
180 186Right-handed alpha
Helix 95
95
G
194 198Right-handed 310
Helix 96
96
G
212 223Right-handed alpha
Helix 97
97
G
237 242Right-handed alpha
Helix 98
98
G
242 258Right-handed alpha
Helix 99
99
H
15 20Right-handed 310
Helix 100
100
H
21 29Right-handed alpha
Helix 101
101
H
47 51Right-handed 310
Helix 102
102
H
53 58Right-handed alpha
Helix 103
103
H
58 68Right-handed alpha
Helix 104
104
H
82 94Right-handed alpha
Helix 105
105
H
115 125Right-handed alpha
Helix 106
106
H
150 157Right-handed alpha
Helix 107
107
H
163 174Right-handed alpha
Helix 108
108
H
180 186Right-handed alpha
Helix 109
109
H
194 198Right-handed 310
Helix 110
110
H
212 223Right-handed alpha
Helix 111
111
H
237 242Right-handed alpha
Helix 112
112
H
242 258Right-handed alpha
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There are 16 sheets in PDB entry 3X3H. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
32 35first strand
Strand 2
A
5 9parallel
Strand 3
A
74 79parallel
Strand 4
A
97 103parallel
Strand 5
A
200 204parallel
Strand 6
A
227 230parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
132 137first strand
Strand 2
A
143 148anti-parallel
Strand 3
A
177 178anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
32 35first strand
Strand 2
B
5 9parallel
Strand 3
B
74 79parallel
Strand 4
B
97 103parallel
Strand 5
B
200 204parallel
Strand 6
B
227 230parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
132 137first strand
Strand 2
B
143 148anti-parallel
Strand 3
B
177 178anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
32 35first strand
Strand 2
C
5 9parallel
Strand 3
C
74 79parallel
Strand 4
C
97 103parallel
Strand 5
C
200 204parallel
Strand 6
C
227 230parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
132 137first strand
Strand 2
C
143 148anti-parallel
Strand 3
C
177 178anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
32 35first strand
Strand 2
D
5 9parallel
Strand 3
D
74 79parallel
Strand 4
D
97 103parallel
Strand 5
D
200 204parallel
Strand 6
D
227 230parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
132 137first strand
Strand 2
D
143 148anti-parallel
Strand 3
D
177 178anti-parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
32 35first strand
Strand 2
E
5 9parallel
Strand 3
E
74 79parallel
Strand 4
E
97 103parallel
Strand 5
E
200 204parallel
Strand 6
E
227 230parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
132 137first strand
Strand 2
E
143 148anti-parallel
Strand 3
E
177 178anti-parallel
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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
32 36first strand
Strand 2
F
5 9parallel
Strand 3
F
74 79parallel
Strand 4
F
97 103parallel
Strand 5
F
200 204parallel
Strand 6
F
227 230parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
132 137first strand
Strand 2
F
143 148anti-parallel
Strand 3
F
177 178anti-parallel
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There are 6 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
32 36first strand
Strand 2
G
5 9parallel
Strand 3
G
74 79parallel
Strand 4
G
97 103parallel
Strand 5
G
200 204parallel
Strand 6
G
227 230parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
132 137first strand
Strand 2
G
143 148anti-parallel
Strand 3
G
177 178anti-parallel
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There are 6 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
32 36first strand
Strand 2
H
5 9parallel
Strand 3
H
74 79parallel
Strand 4
H
97 103parallel
Strand 5
H
200 204parallel
Strand 6
H
227 230parallel
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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
132 137first strand
Strand 2
H
143 148anti-parallel
Strand 3
H
177 178anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il