Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZBO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZBO entry

There are 2 chains in PDB entry 3ZBO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0CYS 235
B
 MET 1CYS 235
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 35 helices in PDB entry 3ZBO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 14Right-handed alpha
Helix 2
2
A
15 25Right-handed alpha
Helix 3
3
A
35 38Right-handed 310
Helix 4
4
A
39 47Right-handed alpha
Helix 5
5
A
49 58Right-handed alpha
Helix 6
6
A
61 72Right-handed alpha
Helix 7
7
A
73 77Right-handed 310
Helix 8
8
A
78 89Right-handed alpha
Helix 9
9
A
91 98Right-handed alpha
Helix 10
10
A
98 105Right-handed alpha
Helix 11
11
A
108 119Right-handed alpha
Helix 12
12
A
121 139Right-handed alpha
Helix 13
13
A
140 144Right-handed 310
Helix 14
14
A
145 160Right-handed alpha
Helix 15
15
A
161 163Right-handed 310
Helix 16
16
A
164 182Right-handed alpha
Helix 17
17
A
185 197Right-handed alpha
Helix 18
18
A
213 223Right-handed alpha
Helix 19
19
B
2 14Right-handed alpha
Helix 20
20
B
15 26Right-handed alpha
Helix 21
21
B
35 38Right-handed 310
Helix 22
22
B
39 47Right-handed alpha
Helix 23
23
B
49 58Right-handed alpha
Helix 24
24
B
61 72Right-handed alpha
Helix 25
25
B
78 88Right-handed alpha
Helix 26
26
B
91 98Right-handed alpha
Helix 27
27
B
98 105Right-handed alpha
Helix 28
28
B
108 119Right-handed alpha
Helix 29
29
B
121 139Right-handed alpha
Helix 30
30
B
140 144Right-handed 310
Helix 31
31
B
145 160Right-handed alpha
Helix 32
32
B
161 163Right-handed 310
Helix 33
33
B
164 182Right-handed alpha
Helix 34
34
B
185 197Right-handed alpha
Helix 35
35
B
213 223Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 3ZBO. Click on sheet of interest to get list of strands forming it: AA, BA,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 201first strand
Strand 2
A
209 212anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
198 203first strand
Strand 2
B
206 212anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il