Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZC4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3ZC4 entry

There are 8 chains in PDB entry 3ZC4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 6	GLU 162
B	PRO 6	GLU 162
C	PRO 6	GLU 162
D	PRO 6	GLU 162
E	GLU 5	GLU 162
F	PRO 6	GLU 162
G	PRO 6	GLU 162
H	PRO 6	ARG 152

There are 81 helices in PDB entry 3ZC4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	6	15	Right-handed alpha
Helix 2	2	A	15	28	Right-handed alpha
Helix 3	3	A	30	33	Right-handed 310
Helix 4	4	A	34	40	Right-handed alpha
Helix 5	5	A	42	64	Right-handed alpha
Helix 6	6	A	90	94	Right-handed 310
Helix 7	7	A	97	102	Right-handed alpha
Helix 8	8	A	133	147	Right-handed alpha
Helix 9	9	A	148	160	Right-handed alpha
Helix 10	10	B	6	15	Right-handed alpha
Helix 11	11	B	15	28	Right-handed alpha
Helix 12	12	B	30	33	Right-handed 310
Helix 13	13	B	34	40	Right-handed alpha
Helix 14	14	B	42	64	Right-handed alpha
Helix 15	15	B	90	94	Right-handed 310
Helix 16	16	B	97	102	Right-handed alpha
Helix 17	17	B	133	147	Right-handed alpha
Helix 18	18	B	148	160	Right-handed alpha
Helix 19	19	C	6	15	Right-handed alpha
Helix 20	20	C	15	28	Right-handed alpha
Helix 21	21	C	30	33	Right-handed 310
Helix 22	22	C	34	40	Right-handed alpha
Helix 23	23	C	42	64	Right-handed alpha
Helix 24	24	C	90	94	Right-handed 310
Helix 25	25	C	97	102	Right-handed alpha
Helix 26	26	C	133	147	Right-handed alpha
Helix 27	27	C	148	160	Right-handed alpha
Helix 28	28	D	6	15	Right-handed alpha
Helix 29	29	D	15	28	Right-handed alpha
Helix 30	30	D	30	33	Right-handed 310
Helix 31	31	D	34	40	Right-handed alpha
Helix 32	32	D	42	64	Right-handed alpha
Helix 33	33	D	90	94	Right-handed 310
Helix 34	34	D	97	102	Right-handed alpha
Helix 35	35	D	133	147	Right-handed alpha
Helix 36	36	D	148	160	Right-handed alpha
Helix 37	37	E	7	15	Right-handed alpha
Helix 38	38	E	15	28	Right-handed alpha
Helix 39	39	E	30	33	Right-handed 310
Helix 40	40	E	34	40	Right-handed alpha
Helix 41	41	E	42	64	Right-handed alpha
Helix 42	42	E	90	94	Right-handed 310
Helix 43	43	E	97	102	Right-handed alpha
Helix 44	44	E	133	147	Right-handed alpha
Helix 45	45	E	148	160	Right-handed alpha
Helix 46	46	F	7	15	Right-handed alpha
Helix 47	47	F	15	28	Right-handed alpha
Helix 48	48	F	30	33	Right-handed 310
Helix 49	49	F	34	40	Right-handed alpha
Helix 50	50	F	42	64	Right-handed alpha
Helix 51	51	F	90	94	Right-handed 310
Helix 52	52	F	97	102	Right-handed alpha
Helix 53	53	F	133	147	Right-handed alpha
Helix 54	54	F	148	160	Right-handed alpha
Helix 55	55	G	7	15	Right-handed alpha
Helix 56	56	G	15	28	Right-handed alpha
Helix 57	57	G	30	33	Right-handed 310
Helix 58	58	G	34	40	Right-handed alpha
Helix 59	59	G	42	64	Right-handed alpha
Helix 60	60	G	90	94	Right-handed 310
Helix 61	61	G	97	102	Right-handed alpha
Helix 62	62	G	133	147	Right-handed alpha
Helix 63	63	G	148	160	Right-handed alpha
Helix 64	64	H	7	15	Right-handed alpha
Helix 65	65	H	15	28	Right-handed alpha
Helix 66	66	H	30	33	Right-handed 310
Helix 67	67	H	34	40	Right-handed alpha
Helix 68	68	H	42	64	Right-handed alpha
Helix 69	69	H	90	94	Right-handed 310
Helix 70	70	H	97	102	Right-handed alpha
Helix 71	71	H	133	147	Right-handed alpha
Helix 72	72	H	148	160	Right-handed alpha
Helix 73	73	I	7	15	Right-handed alpha
Helix 74	74	I	15	28	Right-handed alpha
Helix 75	75	I	30	33	Right-handed 310
Helix 76	76	I	34	40	Right-handed alpha
Helix 77	77	I	42	64	Right-handed alpha
Helix 78	78	I	90	94	Right-handed 310
Helix 79	79	I	97	102	Right-handed alpha
Helix 80	80	I	133	147	Right-handed alpha
Helix 81	81	I	148	160	Right-handed alpha

There are 27 sheets in PDB entry 3ZC4. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC, CA, CB, CC, A, DB, C, EA, EB, EC, FA, FB, FC, GA, GB, GC, HA, HB, HC, IA, IB, IC,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	65	72	first strand
Strand 2	A	79	85	anti-parallel

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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	87	89	first strand
Strand 2	A	115	117	anti-parallel
Strand 3	A	106	108	anti-parallel

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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	120	123	first strand
Strand 2	A	126	129	anti-parallel

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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	65	72	first strand
Strand 2	B	79	85	anti-parallel

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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	87	89	first strand
Strand 2	B	115	117	anti-parallel
Strand 3	B	106	108	anti-parallel

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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	120	123	first strand
Strand 2	B	126	129	anti-parallel

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There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	65	72	first strand
Strand 2	C	79	85	anti-parallel

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There are 3 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	87	89	first strand
Strand 2	C	115	117	anti-parallel
Strand 3	C	106	108	anti-parallel

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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	120	123	first strand
Strand 2	C	126	129	anti-parallel

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There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	65	72	first strand
Strand 2	D	79	85	anti-parallel

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There are 3 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	87	89	first strand
Strand 2	D	115	117	anti-parallel
Strand 3	D	106	108	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	120	123	first strand
Strand 2	D	126	129	anti-parallel

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There are 2 strands in EA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	65	72	first strand
Strand 2	E	79	85	anti-parallel

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There are 3 strands in EB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	87	89	first strand
Strand 2	E	115	117	anti-parallel
Strand 3	E	106	108	anti-parallel

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There are 2 strands in EC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	120	123	first strand
Strand 2	E	126	129	anti-parallel

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There are 2 strands in FA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	65	72	first strand
Strand 2	F	79	85	anti-parallel

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There are 3 strands in FB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	87	89	first strand
Strand 2	F	115	117	anti-parallel
Strand 3	F	106	108	anti-parallel

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There are 2 strands in FC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	120	123	first strand
Strand 2	F	126	129	anti-parallel

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There are 2 strands in GA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	65	72	first strand
Strand 2	G	79	85	anti-parallel

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There are 3 strands in GB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	87	89	first strand
Strand 2	G	115	117	anti-parallel
Strand 3	G	106	108	anti-parallel

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There are 2 strands in GC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	120	123	first strand
Strand 2	G	126	129	anti-parallel

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There are 2 strands in HA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	65	70	first strand
Strand 2	H	80	85	anti-parallel

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There are 3 strands in HB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	87	89	first strand
Strand 2	H	115	117	anti-parallel
Strand 3	H	106	108	anti-parallel

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There are 2 strands in HC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	120	123	first strand
Strand 2	H	126	129	anti-parallel

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There are 2 strands in IA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	65	72	first strand
Strand 2	I	79	85	anti-parallel

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There are 3 strands in IB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	87	89	first strand
Strand 2	I	115	117	anti-parallel
Strand 3	I	106	108	anti-parallel

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There are 2 strands in IC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	120	123	first strand
Strand 2	I	126	129	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3ZC4

Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZC4