Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZC6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZC6 entry

There are 8 chains in PDB entry 3ZC6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 814ASP 979
A
 VAL 982SER 1100
B
 ASP 813ASP 979
B
 VAL 982SER 1100
C
 PRO 814ASP 979
C
 VAL 982SER 1100
D
 PRO 814ASP 979
D
 VAL 982SER 1100
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 3ZC6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
2
A
861 878Right-handed alpha
Helix 2
3
A
909 917Right-handed alpha
Helix 3
5
A
922 943Right-handed alpha
Helix 4
8
A
995 1002Right-handed alpha
Helix 5
9
A
1006 1022Right-handed alpha
Helix 6
11
A
1029 1038Right-handed alpha
Helix 7
12
A
1045 1056Right-handed alpha
Helix 8
13
A
1067 1078Right-handed alpha
Helix 9
14
A
1081 1085Right-handed 310
Helix 10
15
A
1087 1097Right-handed alpha
Helix 11
2
B
861 878Right-handed alpha
Helix 12
3
B
909 917Right-handed alpha
Helix 13
5
B
922 943Right-handed alpha
Helix 14
8
B
995 1002Right-handed alpha
Helix 15
9
B
1006 1022Right-handed alpha
Helix 16
11
B
1029 1038Right-handed alpha
Helix 17
12
B
1045 1056Right-handed alpha
Helix 18
13
B
1067 1078Right-handed alpha
Helix 19
14
B
1081 1085Right-handed 310
Helix 20
15
B
1087 1097Right-handed alpha
Helix 21
2
C
861 878Right-handed alpha
Helix 22
3
C
909 917Right-handed alpha
Helix 23
5
C
922 943Right-handed alpha
Helix 24
8
C
995 1002Right-handed alpha
Helix 25
9
C
1006 1022Right-handed alpha
Helix 26
11
C
1029 1038Right-handed alpha
Helix 27
12
C
1045 1056Right-handed alpha
Helix 28
13
C
1067 1078Right-handed alpha
Helix 29
14
C
1081 1085Right-handed 310
Helix 30
15
C
1087 1097Right-handed alpha
Helix 31
2
D
861 878Right-handed alpha
Helix 32
3
D
909 917Right-handed alpha
Helix 33
5
D
922 943Right-handed alpha
Helix 34
8
D
995 1002Right-handed alpha
Helix 35
9
D
1006 1022Right-handed alpha
Helix 36
11
D
1029 1038Right-handed alpha
Helix 37
12
D
1047 1056Right-handed alpha
Helix 38
13
D
1067 1078Right-handed alpha
Helix 39
14
D
1081 1085Right-handed 310
Helix 40
15
D
1087 1097Right-handed alpha
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There are 12 sheets in PDB entry 3ZC6. Click on sheet of interest to get list of strands forming it: AA, AC, AD, BA, BC, BD, CA, CC, CD, A, C, DD,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
822 831first strand
Strand 2
A
834 841anti-parallel
Strand 3
A
850 856anti-parallel
Strand 4
A
899 903anti-parallel
Strand 5
A
886 890anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
955 959first strand
Strand 2
A
962 965anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
980 982first strand
Strand 2
A
1003 1005anti-parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
822 831first strand
Strand 2
B
834 841anti-parallel
Strand 3
B
850 856anti-parallel
Strand 4
B
899 903anti-parallel
Strand 5
B
886 890anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
955 959first strand
Strand 2
B
962 965anti-parallel
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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
980 982first strand
Strand 2
B
1003 1005anti-parallel
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There are 5 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
822 831first strand
Strand 2
C
834 841anti-parallel
Strand 3
C
850 856anti-parallel
Strand 4
C
899 903anti-parallel
Strand 5
C
886 890anti-parallel
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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
955 959first strand
Strand 2
C
962 965anti-parallel
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There are 2 strands in CD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
980 982first strand
Strand 2
C
1003 1005anti-parallel
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There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
822 831first strand
Strand 2
D
834 841anti-parallel
Strand 3
D
850 856anti-parallel
Strand 4
D
899 903anti-parallel
Strand 5
D
886 890anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
955 959first strand
Strand 2
D
962 965anti-parallel
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There are 2 strands in DD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
980 982first strand
Strand 2
D
1003 1005anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il