Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZET


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZET entry

There are 2 chains in PDB entry 3ZET (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 229
B
 MET 1ALA 337
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 24 helices in PDB entry 3ZET. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
33 49Right-handed alpha
Helix 2
2
A
52 56Right-handed 310
Helix 3
3
A
67 86Right-handed alpha
Helix 4
4
A
94 107Right-handed alpha
Helix 5
5
A
137 141Right-handed 310
Helix 6
6
A
145 156Right-handed alpha
Helix 7
7
A
165 170Right-handed alpha
Helix 8
8
A
171 174Right-handed 310
Helix 9
9
A
190 204Right-handed alpha
Helix 10
10
A
209 213Right-handed 310
Helix 11
11
B
32 38Right-handed alpha
Helix 12
12
B
43 67Right-handed alpha
Helix 13
13
B
69 73Right-handed 310
Helix 14
14
B
84 103Right-handed alpha
Helix 15
15
B
111 118Right-handed alpha
Helix 16
16
B
119 122Right-handed 310
Helix 17
17
B
161 173Right-handed alpha
Helix 18
18
B
179 188Right-handed alpha
Helix 19
19
B
211 224Right-handed alpha
Helix 20
20
B
228 259Right-handed alpha
Helix 21
21
B
267 271Right-handed 310
Helix 22
22
B
272 286Right-handed alpha
Helix 23
23
B
294 298Right-handed 310
Helix 24
24
B
302 315Right-handed alpha
Back to top of page

There are 7 sheets in PDB entry 3ZET. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, BA, BB,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 29first strand
Strand 2
A
12 19anti-parallel
Strand 3
A
2 7anti-parallel
Strand 4
A
58 64parallel
Strand 5
A
89 93parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 136first strand
Strand 2
A
122 129parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 144first strand
Strand 2
A
122 129anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 183first strand
Strand 2
A
159 163parallel
Strand 3
A
110 115parallel
Strand 4
A
122 129anti-parallel
Strand 5
A
135 136parallel
Back to list of sheets
Back to top of page

There are 5 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 183first strand
Strand 2
A
159 163parallel
Strand 3
A
110 115parallel
Strand 4
A
122 129anti-parallel
Strand 5
A
142 144anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 31first strand
Strand 2
B
12 19anti-parallel
Strand 3
B
2 7anti-parallel
Strand 4
B
75 81parallel
Strand 5
B
106 110parallel
Back to list of sheets
Back to top of page

There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
150 156first strand
Strand 2
B
140 147anti-parallel
Strand 3
B
130 135anti-parallel
Strand 4
B
262 266parallel
Strand 5
B
289 291parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il