Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZFV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3ZFV entry

There are 4 chains in PDB entry 3ZFV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 1	LYS 282
B	PRO 2	ARG 283
C	ILE 4	ARG 283
D	PRO 2	ARG 283

There are 32 helices in PDB entry 3ZFV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	24	33	Right-handed alpha
Helix 2	2	A	121	131	Right-handed alpha
Helix 3	3	A	148	152	Right-handed 310
Helix 4	4	A	153	157	Right-handed 310
Helix 5	5	A	172	188	Right-handed alpha
Helix 6	6	A	193	208	Right-handed alpha
Helix 7	7	A	246	264	Right-handed alpha
Helix 8	8	A	268	272	Right-handed 310
Helix 9	9	B	24	33	Right-handed alpha
Helix 10	10	B	121	131	Right-handed alpha
Helix 11	11	B	148	152	Right-handed 310
Helix 12	12	B	153	157	Right-handed 310
Helix 13	13	B	172	188	Right-handed alpha
Helix 14	14	B	193	208	Right-handed alpha
Helix 15	15	B	246	264	Right-handed alpha
Helix 16	16	B	268	272	Right-handed 310
Helix 17	17	C	24	33	Right-handed alpha
Helix 18	18	C	120	131	Right-handed alpha
Helix 19	19	C	148	152	Right-handed 310
Helix 20	20	C	153	157	Right-handed 310
Helix 21	21	C	172	188	Right-handed alpha
Helix 22	22	C	193	208	Right-handed alpha
Helix 23	23	C	246	264	Right-handed alpha
Helix 24	24	C	268	272	Right-handed 310
Helix 25	25	D	24	33	Right-handed alpha
Helix 26	26	D	121	131	Right-handed alpha
Helix 27	27	D	148	152	Right-handed 310
Helix 28	28	D	153	157	Right-handed 310
Helix 29	29	D	172	188	Right-handed alpha
Helix 30	30	D	193	208	Right-handed alpha
Helix 31	31	D	246	264	Right-handed alpha
Helix 32	32	D	268	272	Right-handed 310

There are 14 sheets in PDB entry 3ZFV. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, CA, CB, CC, A, DB, C, DD,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	55	first strand
Strand 2	A	81	88	anti-parallel
Strand 3	A	3	13	anti-parallel
Strand 4	A	107	120	anti-parallel
Strand 5	A	100	104	anti-parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	17	18	first strand
Strand 2	A	74	75	anti-parallel

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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	59	60	first strand
Strand 2	A	63	64	anti-parallel

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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	209	221	first strand
Strand 2	A	232	243	anti-parallel
Strand 3	A	135	144	anti-parallel
Strand 4	A	276	281	anti-parallel

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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	55	first strand
Strand 2	B	81	88	anti-parallel
Strand 3	B	3	13	anti-parallel
Strand 4	B	107	120	anti-parallel
Strand 5	B	100	104	anti-parallel

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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	17	18	first strand
Strand 2	B	74	75	anti-parallel

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There are 4 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	209	224	first strand
Strand 2	B	230	243	anti-parallel
Strand 3	B	135	144	anti-parallel
Strand 4	B	276	281	anti-parallel

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There are 4 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	81	87	first strand
Strand 2	C	5	13	anti-parallel
Strand 3	C	107	118	anti-parallel
Strand 4	C	100	104	anti-parallel

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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	17	18	first strand
Strand 2	C	74	75	anti-parallel

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There are 4 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	209	224	first strand
Strand 2	C	230	243	anti-parallel
Strand 3	C	135	144	anti-parallel
Strand 4	C	276	281	anti-parallel

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There are 5 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	53	55	first strand
Strand 2	D	81	89	anti-parallel
Strand 3	D	3	13	anti-parallel
Strand 4	D	107	120	anti-parallel
Strand 5	D	100	104	anti-parallel

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There are 2 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	17	18	first strand
Strand 2	D	74	75	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	59	60	first strand
Strand 2	D	63	64	anti-parallel

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There are 4 strands in DD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	209	220	first strand
Strand 2	D	233	243	anti-parallel
Strand 3	D	135	144	anti-parallel
Strand 4	D	276	281	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3ZFV

Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZFV