Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZFY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZFY entry

There are 2 chains in PDB entry 3ZFY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 632ILE 905
B
 SER 631ILE 905
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 3ZFY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
672 687Right-handed alpha
Helix 2
2
A
718 726Right-handed alpha
Helix 3
3
A
731 752Right-handed alpha
Helix 4
4
A
760 762Right-handed 310
Helix 5
5
A
801 805Right-handed 310
Helix 6
6
A
806 813Right-handed alpha
Helix 7
7
A
816 833Right-handed alpha
Helix 8
8
A
843 853Right-handed alpha
Helix 9
9
A
864 875Right-handed alpha
Helix 10
10
A
878 882Right-handed 310
Helix 11
11
A
884 898Right-handed alpha
Helix 12
12
A
899 904Right-handed 310
Helix 13
13
B
673 687Right-handed alpha
Helix 14
14
B
718 726Right-handed alpha
Helix 15
15
B
731 752Right-handed alpha
Helix 16
16
B
760 762Right-handed 310
Helix 17
17
B
801 805Right-handed 310
Helix 18
18
B
806 813Right-handed alpha
Helix 19
19
B
816 833Right-handed alpha
Helix 20
20
B
843 853Right-handed alpha
Helix 21
21
B
864 875Right-handed alpha
Helix 22
22
B
878 882Right-handed 310
Helix 23
23
B
884 898Right-handed alpha
Helix 24
24
B
899 904Right-handed 310
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There are 4 sheets in PDB entry 3ZFY. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
633 635first strand
Strand 2
A
648 652anti-parallel
Strand 3
A
660 665anti-parallel
Strand 4
A
708 712anti-parallel
Strand 5
A
697 701anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
764 766first strand
Strand 2
A
772 774anti-parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
633 635first strand
Strand 2
B
648 652anti-parallel
Strand 3
B
660 665anti-parallel
Strand 4
B
708 712anti-parallel
Strand 5
B
697 701anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
764 766first strand
Strand 2
B
772 774anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il