Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZGJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZGJ entry

There are 2 chains in PDB entry 3ZGJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 15GLU 367
B
 MET 14GLU 367
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 3ZGJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
28 39Right-handed alpha
Helix 2
2
A
49 53Right-handed 310
Helix 3
3
A
79 89Right-handed alpha
Helix 4
4
A
101 112Right-handed alpha
Helix 5
5
A
167 171Right-handed 310
Helix 6
6
A
190 203Right-handed alpha
Helix 7
7
A
245 255Right-handed alpha
Helix 8
8
A
268 279Right-handed alpha
Helix 9
9
A
287 294Right-handed alpha
Helix 10
10
A
304 312Right-handed alpha
Helix 11
11
A
351 367Right-handed alpha
Helix 12
12
B
28 39Right-handed alpha
Helix 13
13
B
49 53Right-handed 310
Helix 14
14
B
79 89Right-handed alpha
Helix 15
15
B
101 112Right-handed alpha
Helix 16
16
B
167 171Right-handed 310
Helix 17
17
B
190 203Right-handed alpha
Helix 18
18
B
245 254Right-handed alpha
Helix 19
19
B
268 279Right-handed alpha
Helix 20
20
B
287 294Right-handed alpha
Helix 21
21
B
301 312Right-handed alpha
Helix 22
22
B
351 367Right-handed alpha
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There are 4 sheets in PDB entry 3ZGJ. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 9 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 118first strand
Strand 2
A
133 136anti-parallel
Strand 3
A
142 147anti-parallel
Strand 4
A
91 99parallel
Strand 5
A
18 26anti-parallel
Strand 6
A
67 74parallel
Strand 7
A
57 64anti-parallel
Strand 8
A
43 48anti-parallel
Strand 9
A
164 165anti-parallel
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There are 8 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 214first strand
Strand 2
A
217 225anti-parallel
Strand 3
A
232 238anti-parallel
Strand 4
A
178 185parallel
Strand 5
A
258 265anti-parallel
Strand 6
A
338 344parallel
Strand 7
A
321 327anti-parallel
Strand 8
A
314 318anti-parallel
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There are 9 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
116 122first strand
Strand 2
B
131 136anti-parallel
Strand 3
B
142 147anti-parallel
Strand 4
B
91 99parallel
Strand 5
B
18 26anti-parallel
Strand 6
B
67 74parallel
Strand 7
B
57 64anti-parallel
Strand 8
B
43 48anti-parallel
Strand 9
B
164 165anti-parallel
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There are 8 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
206 214first strand
Strand 2
B
217 225anti-parallel
Strand 3
B
232 238anti-parallel
Strand 4
B
178 185parallel
Strand 5
B
258 265anti-parallel
Strand 6
B
338 344parallel
Strand 7
B
321 327anti-parallel
Strand 8
B
314 318anti-parallel
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