Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZGO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZGO entry

There are 3 chains in PDB entry 3ZGO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 32SER 356
B
 GLY 32SER 356
C
 GLN 54SER 356
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 3ZGO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 46Right-handed alpha
Helix 2
2
A
63 72Right-handed alpha
Helix 3
3
A
85 92Right-handed 310
Helix 4
4
A
104 111Right-handed 310
Helix 5
5
A
114 119Right-handed 310
Helix 6
6
A
120 127Right-handed alpha
Helix 7
7
A
128 139Right-handed alpha
Helix 8
8
A
146 158Right-handed alpha
Helix 9
9
A
171 176Right-handed alpha
Helix 10
10
A
179 181Right-handed 310
Helix 11
11
A
205 216Right-handed alpha
Helix 12
12
A
241 250Right-handed alpha
Helix 13
13
A
251 253Right-handed 310
Helix 14
14
A
268 276Right-handed alpha
Helix 15
15
A
294 304Right-handed alpha
Helix 16
16
A
323 336Right-handed alpha
Helix 17
17
A
337 356Right-handed alpha
Helix 18
18
B
33 46Right-handed alpha
Helix 19
19
B
63 73Right-handed alpha
Helix 20
20
B
85 92Right-handed 310
Helix 21
21
B
104 111Right-handed 310
Helix 22
22
B
114 119Right-handed 310
Helix 23
23
B
120 127Right-handed alpha
Helix 24
24
B
128 139Right-handed alpha
Helix 25
25
B
146 158Right-handed alpha
Helix 26
26
B
171 176Right-handed alpha
Helix 27
27
B
179 181Right-handed 310
Helix 28
28
B
205 215Right-handed alpha
Helix 29
29
B
241 254Right-handed alpha
Helix 30
30
B
268 274Right-handed alpha
Helix 31
31
B
294 304Right-handed alpha
Helix 32
32
B
323 335Right-handed alpha
Helix 33
33
B
337 355Right-handed alpha
Helix 34
34
C
63 72Right-handed alpha
Helix 35
35
C
85 92Right-handed 310
Helix 36
36
C
101 108Right-handed alpha
Helix 37
37
C
109 111Right-handed 310
Helix 38
38
C
114 119Right-handed 310
Helix 39
39
C
120 127Right-handed alpha
Helix 40
40
C
128 139Right-handed alpha
Helix 41
41
C
146 158Right-handed alpha
Helix 42
42
C
171 176Right-handed alpha
Helix 43
43
C
179 181Right-handed 310
Helix 44
44
C
205 214Right-handed alpha
Helix 45
45
C
241 250Right-handed alpha
Helix 46
46
C
251 253Right-handed 310
Helix 47
47
C
269 274Right-handed alpha
Helix 48
48
C
294 304Right-handed alpha
Helix 49
49
C
323 335Right-handed alpha
Helix 50
50
C
337 356Right-handed alpha
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There are 6 sheets in PDB entry 3ZGO. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, CA, CB,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
183 185first strand
Strand 2
A
161 166parallel
Strand 3
A
79 83parallel
Strand 4
A
256 260parallel
Strand 5
A
282 286parallel
Strand 6
A
317 321parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 204first strand
Strand 2
A
188 195anti-parallel
Strand 3
A
228 232anti-parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
183 185first strand
Strand 2
B
161 166parallel
Strand 3
B
79 83parallel
Strand 4
B
256 260parallel
Strand 5
B
282 286parallel
Strand 6
B
317 321parallel
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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
203 204first strand
Strand 2
B
188 195anti-parallel
Strand 3
B
228 232anti-parallel
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There are 6 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
183 185first strand
Strand 2
C
161 166parallel
Strand 3
C
79 83parallel
Strand 4
C
256 260parallel
Strand 5
C
282 286parallel
Strand 6
C
317 321parallel
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There are 3 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
203 204first strand
Strand 2
C
188 195anti-parallel
Strand 3
C
228 232anti-parallel
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