Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZH8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZH8 entry


Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 9 chains in PDB entry 3ZH8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 239SER 402
A
 PHE 404LEU 554
A
 PRO 556MET 581
B
 SER 239SER 402
B
 PHE 404LEU 554
B
 PRO 556LEU 580
C
 SER 239SER 402
C
 PHE 404LEU 554
C
 PRO 556LEU 579
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 3ZH8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
241 243Right-handed 310
Helix 2
2
A
278 285Right-handed alpha
Helix 3
3
A
288 302Right-handed alpha
Helix 4
4
A
330 339Right-handed alpha
Helix 5
5
A
342 363Right-handed alpha
Helix 6
6
A
371 373Right-handed 310
Helix 7
7
A
407 411Right-handed 310
Helix 8
8
A
412 417Right-handed alpha
Helix 9
9
A
423 440Right-handed alpha
Helix 10
10
A
456 468Right-handed alpha
Helix 11
11
A
477 488Right-handed alpha
Helix 12
12
A
502 510Right-handed alpha
Helix 13
13
A
511 514Right-handed 310
Helix 14
14
A
517 523Right-handed alpha
Helix 15
15
A
558 563Right-handed alpha
Helix 16
16
A
567 571Right-handed 310
Helix 17
17
B
241 243Right-handed 310
Helix 18
18
B
278 285Right-handed alpha
Helix 19
19
B
288 302Right-handed alpha
Helix 20
20
B
330 339Right-handed alpha
Helix 21
21
B
342 363Right-handed alpha
Helix 22
22
B
371 373Right-handed 310
Helix 23
23
B
407 411Right-handed 310
Helix 24
24
B
412 417Right-handed alpha
Helix 25
25
B
423 440Right-handed alpha
Helix 26
26
B
456 468Right-handed alpha
Helix 27
27
B
477 488Right-handed alpha
Helix 28
28
B
502 510Right-handed alpha
Helix 29
29
B
511 514Right-handed 310
Helix 30
30
B
517 523Right-handed alpha
Helix 31
31
B
558 563Right-handed alpha
Helix 32
32
B
567 571Right-handed 310
Helix 33
33
C
241 243Right-handed 310
Helix 34
34
C
278 285Right-handed alpha
Helix 35
35
C
288 302Right-handed alpha
Helix 36
36
C
330 339Right-handed alpha
Helix 37
37
C
342 363Right-handed alpha
Helix 38
38
C
371 373Right-handed 310
Helix 39
39
C
407 411Right-handed 310
Helix 40
40
C
412 417Right-handed alpha
Helix 41
41
C
423 440Right-handed alpha
Helix 42
42
C
456 468Right-handed alpha
Helix 43
43
C
477 488Right-handed alpha
Helix 44
44
C
502 510Right-handed alpha
Helix 45
45
C
511 514Right-handed 310
Helix 46
46
C
517 523Right-handed alpha
Helix 47
47
C
558 563Right-handed alpha
Helix 48
48
C
567 571Right-handed 310
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There are 6 sheets in PDB entry 3ZH8. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, CA, CB,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
245 253first strand
Strand 2
A
257 264anti-parallel
Strand 3
A
270 277anti-parallel
Strand 4
A
318 324anti-parallel
Strand 5
A
309 314anti-parallel
Strand 6
A
575 576anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
375 377first strand
Strand 2
A
383 385anti-parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
245 253first strand
Strand 2
B
257 264anti-parallel
Strand 3
B
270 277anti-parallel
Strand 4
B
318 324anti-parallel
Strand 5
B
309 314anti-parallel
Strand 6
B
575 576anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
375 377first strand
Strand 2
B
383 385anti-parallel
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There are 6 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
245 253first strand
Strand 2
C
257 264anti-parallel
Strand 3
C
270 277anti-parallel
Strand 4
C
318 324anti-parallel
Strand 5
C
309 314anti-parallel
Strand 6
C
575 576anti-parallel
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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
375 377first strand
Strand 2
C
383 385anti-parallel
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