Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZIE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZIE entry

There are 6 chains in PDB entry 3ZIE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 37SER 119
B
 VAL 37SER 121
C
 VAL 37SER 119
D
 VAL 37ARG 118
E
 VAL 37SER 119
F
 VAL 37SER 120
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 3ZIE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
49 59Right-handed alpha
Helix 2
2
A
68 71Right-handed 310
Helix 3
3
A
73 92Right-handed alpha
Helix 4
4
B
46 48Right-handed 310
Helix 5
5
B
49 59Right-handed alpha
Helix 6
6
B
68 71Right-handed 310
Helix 7
7
B
73 92Right-handed alpha
Helix 8
8
C
46 48Right-handed 310
Helix 9
9
C
49 59Right-handed alpha
Helix 10
10
C
68 71Right-handed 310
Helix 11
11
C
73 92Right-handed alpha
Helix 12
12
D
46 48Right-handed 310
Helix 13
13
D
49 59Right-handed alpha
Helix 14
14
D
68 71Right-handed 310
Helix 15
15
D
73 92Right-handed alpha
Helix 16
16
E
46 48Right-handed 310
Helix 17
17
E
49 59Right-handed alpha
Helix 18
18
E
68 71Right-handed 310
Helix 19
19
E
73 92Right-handed alpha
Helix 20
20
F
46 48Right-handed 310
Helix 21
21
F
49 59Right-handed alpha
Helix 22
22
F
73 91Right-handed alpha
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There are 6 sheets in PDB entry 3ZIE. Click on sheet of interest to get list of strands forming it: AA, AB, CA, CB, EA, EB,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 98first strand
Strand 2
A
102 106anti-parallel
Strand 3
A
62 66anti-parallel
Strand 4
A
38 43parallel
Strand 5
B
111 117parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 117first strand
Strand 2
B
38 43parallel
Strand 3
B
62 66parallel
Strand 4
B
102 106anti-parallel
Strand 5
B
94 98anti-parallel
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There are 5 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
94 98first strand
Strand 2
C
102 106anti-parallel
Strand 3
C
62 66anti-parallel
Strand 4
C
38 43parallel
Strand 5
D
111 117parallel
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There are 5 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
111 117first strand
Strand 2
D
38 43parallel
Strand 3
D
62 66parallel
Strand 4
D
102 106anti-parallel
Strand 5
D
94 98anti-parallel
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There are 5 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
94 98first strand
Strand 2
E
102 106anti-parallel
Strand 3
E
62 66anti-parallel
Strand 4
E
38 43parallel
Strand 5
F
111 117parallel
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There are 5 strands in EB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
111 117first strand
Strand 2
F
38 43parallel
Strand 3
F
62 66parallel
Strand 4
F
102 105anti-parallel
Strand 5
F
95 98anti-parallel
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