Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZIU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZIU entry

There are 2 chains in PDB entry 3ZIU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 1ILE 637
B
 LEU 1LEU 575
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 60 helices in PDB entry 3ZIU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 8Right-handed 310
Helix 2
2
A
10 25Right-handed alpha
Helix 3
3
A
56 73Right-handed alpha
Helix 4
4
A
87 97Right-handed alpha
Helix 5
5
A
100 118Right-handed alpha
Helix 6
6
A
124 128Right-handed 310
Helix 7
7
A
133 150Right-handed alpha
Helix 8
8
A
171 173Right-handed 310
Helix 9
9
A
204 206Right-handed 310
Helix 10
10
A
207 214Right-handed alpha
Helix 11
11
A
215 218Right-handed 310
Helix 12
12
A
221 233Right-handed alpha
Helix 13
13
A
293 297Right-handed 310
Helix 14
14
A
298 302Right-handed alpha
Helix 15
15
A
320 325Right-handed alpha
Helix 16
16
A
326 334Right-handed alpha
Helix 17
17
A
345 356Right-handed alpha
Helix 18
18
A
364 368Right-handed 310
Helix 19
19
A
370 385Right-handed alpha
Helix 20
20
A
412 416Right-handed 310
Helix 21
21
A
420 428Right-handed alpha
Helix 22
22
A
429 440Right-handed alpha
Helix 23
23
A
450 474Right-handed alpha
Helix 24
24
A
475 477Right-handed 310
Helix 25
25
A
484 504Right-handed alpha
Helix 26
26
A
506 522Right-handed alpha
Helix 27
27
A
530 541Right-handed alpha
Helix 28
28
A
544 555Right-handed alpha
Helix 29
29
A
559 563Right-handed 310
Helix 30
30
A
569 573Right-handed 310
Helix 31
31
B
4 8Right-handed 310
Helix 32
32
B
10 25Right-handed alpha
Helix 33
33
B
56 73Right-handed alpha
Helix 34
34
B
87 97Right-handed alpha
Helix 35
35
B
100 118Right-handed alpha
Helix 36
36
B
124 128Right-handed 310
Helix 37
37
B
133 150Right-handed alpha
Helix 38
38
B
171 173Right-handed 310
Helix 39
39
B
204 206Right-handed 310
Helix 40
40
B
207 214Right-handed alpha
Helix 41
41
B
215 218Right-handed 310
Helix 42
42
B
221 233Right-handed alpha
Helix 43
43
B
293 297Right-handed 310
Helix 44
44
B
298 302Right-handed alpha
Helix 45
45
B
320 325Right-handed alpha
Helix 46
46
B
326 334Right-handed alpha
Helix 47
47
B
345 356Right-handed alpha
Helix 48
48
B
364 368Right-handed 310
Helix 49
49
B
370 385Right-handed alpha
Helix 50
50
B
412 416Right-handed 310
Helix 51
51
B
420 428Right-handed alpha
Helix 52
52
B
429 440Right-handed alpha
Helix 53
53
B
450 474Right-handed alpha
Helix 54
54
B
475 477Right-handed 310
Helix 55
55
B
484 504Right-handed alpha
Helix 56
56
B
506 522Right-handed alpha
Helix 57
57
B
530 541Right-handed alpha
Helix 58
58
B
544 555Right-handed alpha
Helix 59
59
B
559 563Right-handed 310
Helix 60
60
B
569 573Right-handed 310
Back to top of page

There are 13 sheets in PDB entry 3ZIU. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, BA, BB, BC, BD, BE, BF,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 78first strand
Strand 2
A
37 42parallel
Strand 3
A
360 362parallel
Strand 4
A
397 398parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
168 170first strand
Strand 2
A
153 163anti-parallel
Strand 3
A
193 202anti-parallel
Strand 4
A
248 249anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
175 177first strand
Strand 2
A
183 185anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
235 237first strand
Strand 2
A
240 242anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
270 272first strand
Strand 2
A
262 264anti-parallel
Strand 3
A
309 313anti-parallel
Strand 4
A
303 306anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
403 404first strand
Strand 2
A
447 448parallel
Back to list of sheets
Back to top of page

There are 3 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
587 594first strand
Strand 2
A
578 584anti-parallel
Strand 3
A
632 633parallel
Back to list of sheets
Back to top of page

There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
76 78first strand
Strand 2
B
37 42parallel
Strand 3
B
360 362parallel
Strand 4
B
397 398parallel
Back to list of sheets
Back to top of page

There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
168 170first strand
Strand 2
B
153 163anti-parallel
Strand 3
B
193 202anti-parallel
Strand 4
B
248 249anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
175 177first strand
Strand 2
B
183 185anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
234 236first strand
Strand 2
B
241 243anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
270 272first strand
Strand 2
B
262 264anti-parallel
Strand 3
B
309 313anti-parallel
Strand 4
B
303 306anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
403 404first strand
Strand 2
B
447 448parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il