Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZJ4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZJ4 entry

There are 4 chains in PDB entry 3ZJ4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 37ASP 716
B
 GLU 36ASP 716
C
 VAL 37ASP 716
D
 VAL 37ASP 716
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are114 helices in PDB entry 3ZJ4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
38 45Right-handed 310
Helix 2
2
A
81 93Right-handed alpha
Helix 3
3
A
124 128Right-handed 310
Helix 4
4
A
184 186Right-handed 310
Helix 5
5
A
187 196Right-handed alpha
Helix 6
6
A
210 220Right-handed alpha
Helix 7
7
A
223 232Right-handed alpha
Helix 8
8
A
233 236Right-handed 310
Helix 9
9
A
239 243Right-handed 310
Helix 10
10
A
277 288Right-handed alpha
Helix 11
11
A
290 302Right-handed alpha
Helix 12
12
A
316 320Right-handed 310
Helix 13
13
A
355 360Right-handed alpha
Helix 14
14
A
379 398Right-handed alpha
Helix 15
15
A
401 405Right-handed 310
Helix 16
16
A
472 476Right-handed 310
Helix 17
17
A
479 488Right-handed alpha
Helix 18
18
A
490 507Right-handed alpha
Helix 19
19
A
510 525Right-handed alpha
Helix 20
20
A
525 537Right-handed alpha
Helix 21
21
A
580 594Right-handed alpha
Helix 22
22
A
618 622Right-handed 310
Helix 23
23
A
630 635Right-handed 310
Helix 24
24
A
636 641Right-handed 310
Helix 25
25
A
648 660Right-handed alpha
Helix 26
26
A
670 675Right-handed alpha
Helix 27
27
A
690 705Right-handed alpha
Helix 28
28
A
707 711Right-handed 310
Helix 29
29
B
41 45Right-handed 310
Helix 30
30
B
81 93Right-handed alpha
Helix 31
31
B
124 128Right-handed 310
Helix 32
32
B
184 186Right-handed 310
Helix 33
33
B
187 196Right-handed alpha
Helix 34
34
B
210 220Right-handed alpha
Helix 35
35
B
223 232Right-handed alpha
Helix 36
36
B
233 236Right-handed 310
Helix 37
37
B
239 243Right-handed 310
Helix 38
38
B
277 288Right-handed alpha
Helix 39
39
B
290 302Right-handed alpha
Helix 40
40
B
316 320Right-handed 310
Helix 41
41
B
355 360Right-handed alpha
Helix 42
42
B
379 398Right-handed alpha
Helix 43
43
B
401 405Right-handed 310
Helix 44
44
B
472 476Right-handed 310
Helix 45
45
B
479 488Right-handed alpha
Helix 46
46
B
490 507Right-handed alpha
Helix 47
47
B
510 525Right-handed alpha
Helix 48
48
B
525 537Right-handed alpha
Helix 49
49
B
580 595Right-handed alpha
Helix 50
50
B
618 622Right-handed 310
Helix 51
51
B
630 635Right-handed 310
Helix 52
52
B
636 641Right-handed 310
Helix 53
53
B
648 660Right-handed alpha
Helix 54
54
B
670 677Right-handed alpha
Helix 55
55
B
690 705Right-handed alpha
Helix 56
56
B
707 711Right-handed 310
Helix 57
57
C
43 45Right-handed 310
Helix 58
58
C
81 93Right-handed alpha
Helix 59
59
C
124 128Right-handed 310
Helix 60
60
C
184 186Right-handed 310
Helix 61
61
C
187 196Right-handed alpha
Helix 62
62
C
210 220Right-handed alpha
Helix 63
63
C
223 232Right-handed alpha
Helix 64
64
C
233 236Right-handed 310
Helix 65
65
C
239 243Right-handed 310
Helix 66
66
C
277 288Right-handed alpha
Helix 67
67
C
290 302Right-handed alpha
Helix 68
68
C
316 320Right-handed 310
Helix 69
69
C
355 360Right-handed alpha
Helix 70
70
C
379 392Right-handed alpha
Helix 71
71
C
392 398Right-handed alpha
Helix 72
72
C
401 405Right-handed 310
Helix 73
73
C
472 476Right-handed 310
Helix 74
74
C
479 488Right-handed alpha
Helix 75
75
C
490 507Right-handed alpha
Helix 76
76
C
510 525Right-handed alpha
Helix 77
77
C
525 537Right-handed alpha
Helix 78
78
C
580 595Right-handed alpha
Helix 79
79
C
618 622Right-handed 310
Helix 80
80
C
630 635Right-handed 310
Helix 81
81
C
636 641Right-handed 310
Helix 82
82
C
648 660Right-handed alpha
Helix 83
83
C
670 677Right-handed alpha
Helix 84
84
C
690 705Right-handed alpha
Helix 85
85
C
707 711Right-handed 310
Helix 86
86
D
40 45Right-handed 310
Helix 87
87
D
81 93Right-handed alpha
Helix 88
88
D
124 128Right-handed 310
Helix 89
89
D
184 186Right-handed 310
Helix 90
90
D
187 196Right-handed alpha
Helix 91
91
D
210 220Right-handed alpha
Helix 92
92
D
223 232Right-handed alpha
Helix 93
93
D
233 236Right-handed 310
Helix 94
94
D
239 243Right-handed 310
Helix 95
95
D
277 288Right-handed alpha
Helix 96
96
D
290 302Right-handed alpha
Helix 97
97
D
316 320Right-handed 310
Helix 98
98
D
355 360Right-handed alpha
Helix 99
99
D
379 392Right-handed alpha
Helix 100
100
D
392 398Right-handed alpha
Helix 101
101
D
401 405Right-handed 310
Helix 102
102
D
472 476Right-handed 310
Helix 103
103
D
479 488Right-handed alpha
Helix 104
104
D
490 507Right-handed alpha
Helix 105
105
D
510 525Right-handed alpha
Helix 106
106
D
525 537Right-handed alpha
Helix 107
107
D
580 595Right-handed alpha
Helix 108
108
D
618 622Right-handed 310
Helix 109
109
D
630 635Right-handed 310
Helix 110
110
D
636 641Right-handed 310
Helix 111
111
D
648 660Right-handed alpha
Helix 112
112
D
670 677Right-handed alpha
Helix 113
113
D
690 705Right-handed alpha
Helix 114
114
D
707 711Right-handed 310
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There are 14 sheets in PDB entry 3ZJ4. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, CA, AE, BA, BB, BC, BD, CB, CC, A, DB,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 48first strand
Strand 2
C
427 428parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 71first strand
Strand 2
D
462 468anti-parallel
Strand 3
C
462 468anti-parallel
Strand 4
B
70 71anti-parallel
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There are 9 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 114first strand
Strand 2
A
133 142anti-parallel
Strand 3
A
157 165anti-parallel
Strand 4
A
168 175anti-parallel
Strand 5
A
245 246anti-parallel
Strand 6
A
260 269anti-parallel
Strand 7
A
307 315anti-parallel
Strand 8
A
342 351anti-parallel
Strand 9
A
104 114anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
427 428first strand
Strand 2
C
47 48parallel
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There are 4 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
70 71first strand
Strand 2
B
462 468anti-parallel
Strand 3
A
462 468anti-parallel
Strand 4
D
70 71anti-parallel
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There are 6 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
612 613first strand
Strand 2
A
598 603parallel
Strand 3
A
570 574parallel
Strand 4
A
624 627parallel
Strand 5
A
664 667parallel
Strand 6
A
686 689parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 48first strand
Strand 2
D
427 428parallel
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There are 9 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
104 114first strand
Strand 2
B
133 142anti-parallel
Strand 3
B
157 165anti-parallel
Strand 4
B
168 175anti-parallel
Strand 5
B
245 246anti-parallel
Strand 6
B
260 269anti-parallel
Strand 7
B
307 315anti-parallel
Strand 8
B
342 351anti-parallel
Strand 9
B
104 114anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
427 428first strand
Strand 2
D
47 48parallel
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There are 6 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
612 613first strand
Strand 2
B
598 603parallel
Strand 3
B
570 574parallel
Strand 4
B
624 627parallel
Strand 5
B
664 667parallel
Strand 6
B
686 689parallel
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There are 9 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
104 114first strand
Strand 2
C
133 142anti-parallel
Strand 3
C
157 165anti-parallel
Strand 4
C
168 175anti-parallel
Strand 5
C
245 246anti-parallel
Strand 6
C
260 269anti-parallel
Strand 7
C
307 315anti-parallel
Strand 8
C
342 351anti-parallel
Strand 9
C
104 114anti-parallel
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There are 6 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
612 613first strand
Strand 2
C
598 603parallel
Strand 3
C
570 574parallel
Strand 4
C
624 627parallel
Strand 5
C
664 667parallel
Strand 6
C
686 689parallel
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There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
104 114first strand
Strand 2
D
133 142anti-parallel
Strand 3
D
157 165anti-parallel
Strand 4
D
168 175anti-parallel
Strand 5
D
245 246anti-parallel
Strand 6
D
260 269anti-parallel
Strand 7
D
307 315anti-parallel
Strand 8
D
342 351anti-parallel
Strand 9
D
104 114anti-parallel
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There are 6 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
612 613first strand
Strand 2
D
598 603parallel
Strand 3
D
570 574parallel
Strand 4
D
624 627parallel
Strand 5
D
664 667parallel
Strand 6
D
686 689parallel
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