Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZKG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZKG entry

There are 2 chains in PDB entry 3ZKG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 14PRO 397
B
 LEU 16PRO 397
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 20 helices in PDB entry 3ZKG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 18Right-handed 310
Helix 2
2
A
69 73Right-handed 310
Helix 3
3
A
139 143Right-handed 310
Helix 4
4
A
151 161Right-handed alpha
Helix 5
5
A
193 197Right-handed 310
Helix 6
6
A
229 235Right-handed 310
Helix 7
7
A
251 265Right-handed alpha
Helix 8
8
A
271 276Right-handed alpha
Helix 9
9
A
288 293Right-handed 310
Helix 10
10
A
314 318Right-handed alpha
Helix 11
11
A
346 351Right-handed alpha
Helix 12
12
B
69 73Right-handed 310
Helix 13
13
B
139 143Right-handed 310
Helix 14
14
B
151 161Right-handed alpha
Helix 15
15
B
193 197Right-handed 310
Helix 16
16
B
229 233Right-handed 310
Helix 17
17
B
251 263Right-handed alpha
Helix 18
18
B
288 293Right-handed 310
Helix 19
19
B
314 318Right-handed alpha
Helix 20
20
B
346 351Right-handed alpha
Back to top of page

There are 14 sheets in PDB entry 3ZKG. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, BA, BB, BC, BD, BE, BF, BG,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 86first strand
Strand 2
A
91 103anti-parallel
Strand 3
A
29 36anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 86first strand
Strand 2
A
91 103anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 225first strand
Strand 2
A
216 221anti-parallel
Strand 3
A
296 301anti-parallel
Strand 4
A
307 313anti-parallel
Strand 5
A
380 387anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
237 240first strand
Strand 2
A
342 345parallel
Back to list of sheets
Back to top of page

There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 250first strand
Strand 2
A
336 339parallel
Back to list of sheets
Back to top of page

There are 6 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
319 321first strand
Strand 2
A
331 334anti-parallel
Strand 3
A
279 282anti-parallel
Strand 4
B
279 282anti-parallel
Strand 5
B
331 334anti-parallel
Strand 6
B
319 321anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 374first strand
Strand 2
A
377 378anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 25first strand
Strand 2
B
29 36anti-parallel
Strand 3
B
41 48anti-parallel
Strand 4
B
133 136parallel
Strand 5
B
54 57anti-parallel
Strand 6
B
111 122parallel
Strand 7
B
91 102anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 25first strand
Strand 2
B
29 36anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
185 189first strand
Strand 2
B
165 170anti-parallel
Strand 3
B
353 358anti-parallel
Strand 4
B
363 368anti-parallel
Strand 5
B
198 205anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
213 214first strand
Strand 2
B
237 240anti-parallel
Strand 3
B
342 345parallel
Back to list of sheets
Back to top of page

There are 4 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
216 221first strand
Strand 2
B
296 301anti-parallel
Strand 3
B
307 313anti-parallel
Strand 4
B
380 387anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
247 250first strand
Strand 2
B
336 339parallel
Back to list of sheets
Back to top of page

There are 2 strands in BG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
373 374first strand
Strand 2
B
377 378anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il