Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZL8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZL8 entry

There is 1 chain in PDB entry 3ZL8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 427
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 3ZL8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 7Right-handed 310
Helix 2
2
A
12 16Right-handed 310
Helix 3
3
A
32 34Right-handed 310
Helix 4
4
A
35 42Right-handed alpha
Helix 5
5
A
64 78Right-handed alpha
Helix 6
6
A
92 105Right-handed alpha
Helix 7
7
A
121 131Right-handed alpha
Helix 8
8
A
147 156Right-handed alpha
Helix 9
9
A
170 175Right-handed alpha
Helix 10
10
A
176 185Right-handed alpha
Helix 11
11
A
185 190Right-handed alpha
Helix 12
12
A
203 210Right-handed alpha
Helix 13
13
A
211 213Right-handed 310
Helix 14
14
A
258 275Right-handed alpha
Helix 15
15
A
280 286Right-handed alpha
Helix 16
16
A
312 324Right-handed alpha
Helix 17
17
A
340 342Right-handed 310
Helix 18
18
A
343 356Right-handed alpha
Helix 19
19
A
367 373Right-handed 310
Helix 20
20
A
384 394Right-handed alpha
Helix 21
21
A
407 411Right-handed 310
Helix 22
22
A
412 427Right-handed alpha
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There are 3 sheets in PDB entry 3ZL8. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 10first strand
Strand 2
A
21 23parallel
Strand 3
A
46 49parallel
Strand 4
A
59 61parallel
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There are 9 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 112first strand
Strand 2
A
136 140parallel
Strand 3
A
83 88parallel
Strand 4
A
160 163parallel
Strand 5
A
196 200parallel
Strand 6
A
215 220parallel
Strand 7
A
226 234parallel
Strand 8
A
237 244anti-parallel
Strand 9
A
247 254anti-parallel
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There are 6 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
295 299first strand
Strand 2
A
302 307anti-parallel
Strand 3
A
401 405parallel
Strand 4
A
330 334parallel
Strand 5
A
360 364parallel
Strand 6
A
378 382parallel
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