Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZLA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZLA entry

There are 10 chains in PDB entry 3ZLA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -1ASN 232
B
 GLY -1ASN 232
C
 GLY -1ASN 232
D
 GLY -1ASN 232
E
 GLY -1ASN 232
F
 GLY -1ASN 232
G
 GLY -1ASN 232
H
 GLY -1ASN 232
I
 U 1 U 44
J
 U 1 U 44
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are128 helices in PDB entry 3ZLA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 30Right-handed alpha
Helix 2
2
A
35 45Right-handed alpha
Helix 3
3
A
45 56Right-handed alpha
Helix 4
4
A
77 81Right-handed 310
Helix 5
5
A
91 110Right-handed alpha
Helix 6
6
A
111 122Right-handed alpha
Helix 7
7
A
124 130Right-handed alpha
Helix 8
8
A
133 136Right-handed 310
Helix 9
9
A
137 144Right-handed alpha
Helix 10
10
A
147 152Right-handed 310
Helix 11
11
A
157 168Right-handed alpha
Helix 12
12
A
173 178Right-handed 310
Helix 13
13
A
179 183Right-handed 310
Helix 14
14
A
189 197Right-handed alpha
Helix 15
15
A
197 211Right-handed alpha
Helix 16
16
A
219 228Right-handed alpha
Helix 17
17
B
18 30Right-handed alpha
Helix 18
18
B
35 45Right-handed alpha
Helix 19
19
B
45 56Right-handed alpha
Helix 20
20
B
77 81Right-handed 310
Helix 21
21
B
91 110Right-handed alpha
Helix 22
22
B
111 122Right-handed alpha
Helix 23
23
B
124 130Right-handed alpha
Helix 24
24
B
133 136Right-handed 310
Helix 25
25
B
137 144Right-handed alpha
Helix 26
26
B
147 152Right-handed 310
Helix 27
27
B
157 168Right-handed alpha
Helix 28
28
B
173 178Right-handed 310
Helix 29
29
B
179 183Right-handed 310
Helix 30
30
B
189 197Right-handed alpha
Helix 31
31
B
197 211Right-handed alpha
Helix 32
32
B
219 228Right-handed alpha
Helix 33
33
C
18 30Right-handed alpha
Helix 34
34
C
35 45Right-handed alpha
Helix 35
35
C
45 56Right-handed alpha
Helix 36
36
C
77 81Right-handed 310
Helix 37
37
C
91 110Right-handed alpha
Helix 38
38
C
111 122Right-handed alpha
Helix 39
39
C
124 130Right-handed alpha
Helix 40
40
C
133 136Right-handed 310
Helix 41
41
C
137 144Right-handed alpha
Helix 42
42
C
147 152Right-handed 310
Helix 43
43
C
157 168Right-handed alpha
Helix 44
44
C
173 178Right-handed 310
Helix 45
45
C
179 183Right-handed 310
Helix 46
46
C
189 197Right-handed alpha
Helix 47
47
C
197 211Right-handed alpha
Helix 48
48
C
219 228Right-handed alpha
Helix 49
49
D
18 30Right-handed alpha
Helix 50
50
D
35 45Right-handed alpha
Helix 51
51
D
45 56Right-handed alpha
Helix 52
52
D
77 81Right-handed 310
Helix 53
53
D
91 110Right-handed alpha
Helix 54
54
D
111 122Right-handed alpha
Helix 55
55
D
124 130Right-handed alpha
Helix 56
56
D
133 136Right-handed 310
Helix 57
57
D
137 144Right-handed alpha
Helix 58
58
D
147 152Right-handed 310
Helix 59
59
D
157 168Right-handed alpha
Helix 60
60
D
173 178Right-handed 310
Helix 61
61
D
179 183Right-handed 310
Helix 62
62
D
189 197Right-handed alpha
Helix 63
63
D
197 211Right-handed alpha
Helix 64
64
D
219 228Right-handed alpha
Helix 65
65
E
18 30Right-handed alpha
Helix 66
66
E
35 45Right-handed alpha
Helix 67
67
E
45 56Right-handed alpha
Helix 68
68
E
77 81Right-handed 310
Helix 69
69
E
91 110Right-handed alpha
Helix 70
70
E
111 122Right-handed alpha
Helix 71
71
E
124 130Right-handed alpha
Helix 72
72
E
133 136Right-handed 310
Helix 73
73
E
137 144Right-handed alpha
Helix 74
74
E
147 152Right-handed 310
Helix 75
75
E
157 168Right-handed alpha
Helix 76
76
E
173 178Right-handed 310
Helix 77
77
E
179 183Right-handed 310
Helix 78
78
E
189 197Right-handed alpha
Helix 79
79
E
197 211Right-handed alpha
Helix 80
80
E
219 228Right-handed alpha
Helix 81
81
F
18 30Right-handed alpha
Helix 82
82
F
35 45Right-handed alpha
Helix 83
83
F
45 56Right-handed alpha
Helix 84
84
F
77 81Right-handed 310
Helix 85
85
F
91 110Right-handed alpha
Helix 86
86
F
111 122Right-handed alpha
Helix 87
87
F
124 130Right-handed alpha
Helix 88
88
F
133 136Right-handed 310
Helix 89
89
F
137 144Right-handed alpha
Helix 90
90
F
147 152Right-handed 310
Helix 91
91
F
157 168Right-handed alpha
Helix 92
92
F
173 178Right-handed 310
Helix 93
93
F
179 183Right-handed 310
Helix 94
94
F
189 197Right-handed alpha
Helix 95
95
F
197 211Right-handed alpha
Helix 96
96
F
219 228Right-handed alpha
Helix 97
97
G
18 30Right-handed alpha
Helix 98
98
G
35 45Right-handed alpha
Helix 99
99
G
45 56Right-handed alpha
Helix 100
100
G
77 81Right-handed 310
Helix 101
101
G
91 110Right-handed alpha
Helix 102
102
G
111 122Right-handed alpha
Helix 103
103
G
124 130Right-handed alpha
Helix 104
104
G
133 136Right-handed 310
Helix 105
105
G
137 144Right-handed alpha
Helix 106
106
G
147 152Right-handed 310
Helix 107
107
G
157 168Right-handed alpha
Helix 108
108
G
173 178Right-handed 310
Helix 109
109
G
179 183Right-handed 310
Helix 110
110
G
189 197Right-handed alpha
Helix 111
111
G
197 211Right-handed alpha
Helix 112
112
G
219 228Right-handed alpha
Helix 113
113
H
18 30Right-handed alpha
Helix 114
114
H
35 45Right-handed alpha
Helix 115
115
H
45 56Right-handed alpha
Helix 116
116
H
77 81Right-handed 310
Helix 117
117
H
91 110Right-handed alpha
Helix 118
118
H
111 122Right-handed alpha
Helix 119
119
H
124 130Right-handed alpha
Helix 120
120
H
133 136Right-handed 310
Helix 121
121
H
137 144Right-handed alpha
Helix 122
122
H
147 152Right-handed 310
Helix 123
123
H
157 168Right-handed alpha
Helix 124
124
H
173 178Right-handed 310
Helix 125
125
H
179 183Right-handed 310
Helix 126
126
H
189 197Right-handed alpha
Helix 127
127
H
197 211Right-handed alpha
Helix 128
128
H
219 228Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 3ZLA. Click on sheet of interest to get list of strands forming it: A, AA, BA, CA,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
68 73first strand
Strand 2
D
60 65anti-parallel
Strand 3
A
0 6parallel
Strand 4
G
0 6anti-parallel
Strand 5
F
60 65parallel
Strand 6
F
68 73anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 73first strand
Strand 2
A
60 65anti-parallel
Strand 3
B
0 6parallel
Strand 4
F
0 6anti-parallel
Strand 5
E
60 65parallel
Strand 6
E
68 73anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
68 73first strand
Strand 2
B
60 65anti-parallel
Strand 3
C
0 6parallel
Strand 4
E
0 6anti-parallel
Strand 5
H
60 65parallel
Strand 6
H
68 73anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
68 73first strand
Strand 2
C
60 65anti-parallel
Strand 3
D
0 6parallel
Strand 4
H
0 6anti-parallel
Strand 5
G
60 65parallel
Strand 6
G
68 73anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il