Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZLQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3ZLQ entry

There are 4 chains in PDB entry 3ZLQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 16	PRO 397
B	PHE 15	PRO 397
C	GLN 160	SER 271
D	GLN 160	SER 271

There are 27 helices in PDB entry 3ZLQ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	69	73	Right-handed 310
Helix 2	2	A	139	143	Right-handed 310
Helix 3	3	A	151	161	Right-handed alpha
Helix 4	4	A	193	197	Right-handed 310
Helix 5	5	A	229	235	Right-handed 310
Helix 6	6	A	251	265	Right-handed alpha
Helix 7	7	A	288	293	Right-handed 310
Helix 8	8	A	314	318	Right-handed alpha
Helix 9	9	A	346	351	Right-handed alpha
Helix 10	10	B	15	19	Right-handed 310
Helix 11	11	B	69	73	Right-handed 310
Helix 12	12	B	139	143	Right-handed 310
Helix 13	13	B	151	161	Right-handed alpha
Helix 14	14	B	193	197	Right-handed 310
Helix 15	15	B	229	234	Right-handed alpha
Helix 16	16	B	251	264	Right-handed alpha
Helix 17	17	B	286	292	Right-handed 310
Helix 18	18	B	314	318	Right-handed alpha
Helix 19	19	B	346	351	Right-handed alpha
Helix 20	20	C	187	191	Right-handed 310
Helix 21	21	C	221	224	Right-handed 310
Helix 22	22	C	233	235	Right-handed 310
Helix 23	23	C	246	250	Right-handed 310
Helix 24	24	D	187	191	Right-handed 310
Helix 25	25	D	221	224	Right-handed 310
Helix 26	26	D	233	235	Right-handed 310
Helix 27	27	D	246	250	Right-handed 310

There are 20 sheets in PDB entry 3ZLQ. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, BA, BB, BC, BD, BE, CA, CB, CC, CD, A, DB, C, DD,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	22	25	first strand
Strand 2	A	29	36	anti-parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	77	87	first strand
Strand 2	A	90	102	anti-parallel

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There are 6 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	185	189	first strand
Strand 2	A	166	170	anti-parallel
Strand 3	A	353	358	anti-parallel
Strand 4	A	363	368	anti-parallel
Strand 5	A	202	208	anti-parallel
Strand 6	A	213	214	anti-parallel

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There are 5 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	224	225	first strand
Strand 2	A	216	221	anti-parallel
Strand 3	A	296	301	anti-parallel
Strand 4	A	307	313	anti-parallel
Strand 5	A	380	387	anti-parallel

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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	238	240	first strand
Strand 2	A	343	345	parallel
Strand 3	A	247	250	anti-parallel
Strand 4	A	336	339	parallel

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There are 6 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	319	321	first strand
Strand 2	A	329	334	anti-parallel
Strand 3	A	279	284	anti-parallel
Strand 4	B	279	284	anti-parallel
Strand 5	B	329	334	anti-parallel
Strand 6	B	319	321	anti-parallel

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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	373	374	first strand
Strand 2	A	377	378	anti-parallel

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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	22	25	first strand
Strand 2	B	29	36	anti-parallel

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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	77	86	first strand
Strand 2	B	91	102	anti-parallel

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There are 10 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	185	189	first strand
Strand 2	B	165	170	anti-parallel
Strand 3	B	353	358	anti-parallel
Strand 4	B	363	368	anti-parallel
Strand 5	B	198	208	anti-parallel
Strand 6	B	213	214	anti-parallel
Strand 7	B	238	240	anti-parallel
Strand 8	B	343	345	parallel
Strand 9	B	247	250	anti-parallel
Strand 10	B	336	339	parallel

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There are 5 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	224	225	first strand
Strand 2	B	216	221	anti-parallel
Strand 3	B	296	301	anti-parallel
Strand 4	B	307	313	anti-parallel
Strand 5	B	380	387	anti-parallel

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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	373	374	first strand
Strand 2	B	377	378	anti-parallel

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There are 4 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	162	166	first strand
Strand 2	C	177	184	anti-parallel
Strand 3	C	237	242	anti-parallel
Strand 4	C	227	232	anti-parallel

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There are 4 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	170	171	first strand
Strand 2	C	265	269	parallel
Strand 3	C	251	257	anti-parallel
Strand 4	C	260	261	anti-parallel

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There are 6 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	170	171	first strand
Strand 2	C	265	269	parallel
Strand 3	C	251	257	anti-parallel
Strand 4	C	193	198	anti-parallel
Strand 5	C	205	210	anti-parallel
Strand 6	C	217	219	anti-parallel

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There are 2 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	260	261	first strand
Strand 2	C	251	257	anti-parallel

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There are 4 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	162	166	first strand
Strand 2	D	177	184	anti-parallel
Strand 3	D	237	242	anti-parallel
Strand 4	D	227	232	anti-parallel

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There are 4 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	170	171	first strand
Strand 2	D	265	269	parallel
Strand 3	D	251	257	anti-parallel
Strand 4	D	260	261	anti-parallel

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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	170	171	first strand
Strand 2	D	265	269	parallel
Strand 3	D	251	257	anti-parallel
Strand 4	D	193	198	anti-parallel
Strand 5	D	204	210	anti-parallel
Strand 6	D	217	219	anti-parallel

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There are 2 strands in DD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	260	261	first strand
Strand 2	D	251	257	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3ZLQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZLQ