Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZMR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZMR entry

There are 2 chains in PDB entry 3ZMR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 42HIS 510
B
 SER 42LEU 503
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 3ZMR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
46 49Right-handed 310
Helix 2
2
A
149 158Right-handed alpha
Helix 3
3
A
191 201Right-handed alpha
Helix 4
4
A
225 242Right-handed alpha
Helix 5
5
A
261 284Right-handed alpha
Helix 6
6
A
309 329Right-handed alpha
Helix 7
7
A
332 336Right-handed 310
Helix 8
8
A
344 346Right-handed 310
Helix 9
9
A
347 355Right-handed alpha
Helix 10
10
A
375 380Right-handed alpha
Helix 11
11
A
392 396Right-handed 310
Helix 12
12
A
405 415Right-handed alpha
Helix 13
13
A
416 422Right-handed alpha
Helix 14
14
A
440 465Right-handed alpha
Helix 15
15
A
490 507Right-handed alpha
Helix 16
16
B
47 49Right-handed 310
Helix 17
17
B
149 158Right-handed alpha
Helix 18
18
B
191 201Right-handed alpha
Helix 19
19
B
225 242Right-handed alpha
Helix 20
20
B
261 283Right-handed alpha
Helix 21
21
B
309 329Right-handed alpha
Helix 22
22
B
332 336Right-handed 310
Helix 23
23
B
344 346Right-handed 310
Helix 24
24
B
347 355Right-handed alpha
Helix 25
25
B
375 380Right-handed alpha
Helix 26
26
B
392 396Right-handed 310
Helix 27
27
B
405 415Right-handed alpha
Helix 28
28
B
416 421Right-handed alpha
Helix 29
29
B
440 465Right-handed alpha
Helix 30
30
B
490 502Right-handed alpha
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There are 10 sheets in PDB entry 3ZMR. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, BA, BB, BC, BD, BE,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 54first strand
Strand 2
A
120 126parallel
Strand 3
A
106 113anti-parallel
Strand 4
A
71 75anti-parallel
Strand 5
A
86 87anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 66first strand
Strand 2
A
90 97anti-parallel
Strand 3
A
80 82anti-parallel
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There are 9 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 162first strand
Strand 2
A
205 208parallel
Strand 3
A
245 249parallel
Strand 4
A
290 293parallel
Strand 5
A
339 342parallel
Strand 6
A
366 372parallel
Strand 7
A
426 431parallel
Strand 8
A
468 471parallel
Strand 9
A
160 162parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 172first strand
Strand 2
A
178 179anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 218first strand
Strand 2
A
223 224anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 45first strand
Strand 2
B
59 66anti-parallel
Strand 3
B
90 97anti-parallel
Strand 4
B
80 82anti-parallel
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There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 54first strand
Strand 2
B
120 126parallel
Strand 3
B
106 113anti-parallel
Strand 4
B
71 75anti-parallel
Strand 5
B
86 87anti-parallel
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There are 9 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
160 162first strand
Strand 2
B
205 208parallel
Strand 3
B
245 249parallel
Strand 4
B
290 293parallel
Strand 5
B
339 342parallel
Strand 6
B
366 372parallel
Strand 7
B
426 431parallel
Strand 8
B
468 471parallel
Strand 9
B
160 162parallel
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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
171 172first strand
Strand 2
B
178 179anti-parallel
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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
216 218first strand
Strand 2
B
223 224anti-parallel
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