Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZNZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZNZ entry

There are 2 chains in PDB entry 3ZNZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 78SER 351
B
 MET 1VAL 146
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 3ZNZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
88 96Right-handed alpha
Helix 2
2
A
100 114Right-handed alpha
Helix 3
3
A
128 141Right-handed alpha
Helix 4
4
A
146 151Right-handed alpha
Helix 5
5
A
152 155Right-handed 310
Helix 6
6
A
156 165Right-handed alpha
Helix 7
7
A
166 171Right-handed 310
Helix 8
8
A
183 204Right-handed alpha
Helix 9
9
A
207 219Right-handed alpha
Helix 10
10
A
221 249Right-handed alpha
Helix 11
11
A
254 261Right-handed alpha
Helix 12
12
A
268 276Right-handed alpha
Helix 13
13
A
288 299Right-handed alpha
Helix 14
14
A
308 310Right-handed 310
Helix 15
15
A
345 349Right-handed 310
Helix 16
16
B
22 35Right-handed alpha
Helix 17
17
B
37 41Right-handed 310
Helix 18
18
B
56 60Right-handed 310
Helix 19
19
B
98 111Right-handed alpha
Helix 20
20
B
113 117Right-handed 310
Helix 21
21
B
132 136Right-handed 310
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There are 5 sheets in PDB entry 3ZNZ. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 87first strand
Strand 2
A
119 121anti-parallel
Strand 3
A
342 344anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
286 287first strand
Strand 2
B
74 75anti-parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
316 319first strand
Strand 2
A
301 306anti-parallel
Strand 3
A
329 334parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 16first strand
Strand 2
B
2 6anti-parallel
Strand 3
B
66 69parallel
Strand 4
B
43 45anti-parallel
Strand 5
B
48 49anti-parallel
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There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
88 92first strand
Strand 2
B
78 82anti-parallel
Strand 3
B
142 146parallel
Strand 4
B
118 121anti-parallel
Strand 5
B
124 125anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il